| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is ankB
Identifier: 42522697
GI number: 42522697
Start: 1096146
End: 1096628
Strand: Direct
Name: ankB
Synonym: Bd1155
Alternate gene names: NA
Gene position: 1096146-1096628 (Clockwise)
Preceding gene: 42522696
Following gene: 42522698
Centisome position: 28.98
GC content: 55.69
Gene sequence:
>483_bases ATGGCGACCTGGGAAGAATATAAAAAGACAATGGTGGTGGAACCGCTGATTTTTGAAGAGGCCCGCAACGGCAACTGCGA GGCCTTGAAGCAGTATCTGGATTTTGGCGGAGGTTTGGAAATTCGTAATTTCAAAGGGCACACGCTGTTGATGCTGGCTG CGTATAACAATCAGGAGGACGCCGCCGAGTTTCTGATCGAACGCGGGGCGGATGTGAACTCCACCGATGATATGGGGAAC TCGGTTTTGATGGGGGTTTGTTTTAAGGGACATGCCCGTCTTGCGGAGTTGTTGCTCAGTAACGGCGCTCGCTTGGAGGA CCGCAACCCCCACGGCATGACGGCTTTGGATCTGGCCAAGGTTTTCGGGCGCAAGGAAGTGGTGTCTTTATTAAGTGACC GGCCGGCTTCCTGGGCGGACCCGATGGAAGTCGCCTGCCGGCTGATTGCGCGCAAGCTGTCGCGGCCAACACCGGAAGCT TGA
Upstream 100 bases:
>100_bases CGATCCTGCTTACGGTAGCGGCTTGGCCGAGCGCATGGGTGTAAAGGTTTATTCAGACAAATATGAAAGTGGCAGTGCCC ATCATTAGGGCGGAGGATGT
Downstream 100 bases:
>100_bases TATCATATATAGAGAAAGCACTGCCAGATTGTGTAAACACTGTGCAGTGCTAAGTGCCTTGTTTCATTGTGGTACGTGAT GGTTTTGTAGAGACGCTTTT
Product: ankyrin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGN SVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA
Sequences:
>Translated_160_residues MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGN SVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA >Mature_159_residues ATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQEDAAEFLIERGADVNSTDDMGNS VLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAKVFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI225543463, Length=122, Percent_Identity=33.6065573770492, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI225543461, Length=122, Percent_Identity=33.6065573770492, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI157739945, Length=120, Percent_Identity=32.5, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI17864094, Length=110, Percent_Identity=33.6363636363636, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI62988328, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI268607595, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=4e-11, Organism=Homo sapiens, GI24308163, Length=98, Percent_Identity=37.7551020408163, Blast_Score=64, Evalue=5e-11, Organism=Homo sapiens, GI148596917, Length=116, Percent_Identity=34.4827586206897, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24656436, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656431, Length=114, Percent_Identity=35.0877192982456, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI161078304, Length=113, Percent_Identity=34.5132743362832, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571867, Length=130, Percent_Identity=35.3846153846154, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI28571865, Length=130, Percent_Identity=35.3846153846154, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 17773; Mature: 17641
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQED CCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHH AAEFLIERGADVNSTDDMGNSVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAK HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA HHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATWEEYKKTMVVEPLIFEEARNGNCEALKQYLDFGGGLEIRNFKGHTLLMLAAYNNQED CCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCHHH AAEFLIERGADVNSTDDMGNSVLMGVCFKGHARLAELLLSNGARLEDRNPHGMTALDLAK HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH VFGRKEVVSLLSDRPASWADPMEVACRLIARKLSRPTPEA HHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]