Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522681

Identifier: 42522681

GI number: 42522681

Start: 1075248

End: 1075667

Strand: Direct

Name: 42522681

Synonym: Bd1136

Alternate gene names: NA

Gene position: 1075248-1075667 (Clockwise)

Preceding gene: 42522679

Following gene: 42522689

Centisome position: 28.42

GC content: 53.81

Gene sequence:

>420_bases
ATGAATAGCCAAGACTTTTTGACATTGAACCTAGTGGGAGCGGGGGCTTTCATTGCCTGGTATCTTCTTTCTCGAGGAGG
CAGCCGTCGGCCGACGCAGCTGAACCTGAATGCGAAGGACAGCGCTCCCCCTTTGATGGAGGCGGCTCCCCCTGAAAAGG
CGGGTCTTGAGCCTTTGCGTCGTCAGGCCTCAACCCCTCAGGTGCATCCTGATCTATCTGGAGTAAAAACCAAGTGTCTG
AATGTGATGTTTAATTACAACGGCCACAGCTGGGACGCCTATGAGGTTTTGGGCGTGCCGGCCGGAGCGTCGCTGAAGCT
GGTTACTGAAGCCTATCAGACTGCAATTCGCCGCAGCGACAAAGAATCCCTGGAGTTTCTGGAAACGGCTTACAAAGCCA
TCCTGAATAAAACAGCCTAG

Upstream 100 bases:

>100_bases
TTCACTCCGGGAATCGCGGTCTGCTTTTCAAAAGGATTTGGGGCTGCCATGAATGGGACTCCTTGCTAATTTTGTCCACC
CAACCAATAATAGAACTTGG

Downstream 100 bases:

>100_bases
GCTTACTGTCGTCGGTACGGCATATAGCGTGGAGTTGAGACAAAATTCCCATCCCATCTGTTTTTCGAGCACCACAGATG
CCCCGACGCATTCATCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNSQDFLTLNLVGAGAFIAWYLLSRGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGLEPLRRQASTPQVHPDLSGVKTKCL
NVMFNYNGHSWDAYEVLGVPAGASLKLVTEAYQTAIRRSDKESLEFLETAYKAILNKTA

Sequences:

>Translated_139_residues
MNSQDFLTLNLVGAGAFIAWYLLSRGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGLEPLRRQASTPQVHPDLSGVKTKCL
NVMFNYNGHSWDAYEVLGVPAGASLKLVTEAYQTAIRRSDKESLEFLETAYKAILNKTA
>Mature_139_residues
MNSQDFLTLNLVGAGAFIAWYLLSRGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGLEPLRRQASTPQVHPDLSGVKTKCL
NVMFNYNGHSWDAYEVLGVPAGASLKLVTEAYQTAIRRSDKESLEFLETAYKAILNKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15192; Mature: 15192

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQDFLTLNLVGAGAFIAWYLLSRGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGLEPLR
CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH
RQASTPQVHPDLSGVKTKCLNVMFNYNGHSWDAYEVLGVPAGASLKLVTEAYQTAIRRSD
HCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
KESLEFLETAYKAILNKTA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSQDFLTLNLVGAGAFIAWYLLSRGGSRRPTQLNLNAKDSAPPLMEAAPPEKAGLEPLR
CCCCCEEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHH
RQASTPQVHPDLSGVKTKCLNVMFNYNGHSWDAYEVLGVPAGASLKLVTEAYQTAIRRSD
HCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
KESLEFLETAYKAILNKTA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA