| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is ilvE [H]
Identifier: 42522679
GI number: 42522679
Start: 1072642
End: 1073709
Strand: Direct
Name: ilvE [H]
Synonym: Bd1131
Alternate gene names: 42522679
Gene position: 1072642-1073709 (Clockwise)
Preceding gene: 42522676
Following gene: 42522681
Centisome position: 28.35
GC content: 52.15
Gene sequence:
>1068_bases ATGACCACAATTACGAAGAATCTAACCAACACTCCGAAAGCCCTTCCACCCTCTGATCAGCTTGGATTCGGGCAGCATTT TTCTGACCACATGTTTGTGGCTAAATACACTGAAGGCAAGGGCTGGTCTGAAGCCAGCGTCGTCCCTTATGGGCCGCTTT CTTTGGATCCCGGGGCTTCGGTGTTTCATTATGGTCAGGCTTTGTTTGAAGGCATGAAGGCCTTCCGCAAAGAAAGCGGC GAAGTGGTCTTCTTCCGTCCTGAGTTCAATTATCACCGTTTGGCTGAAGGCGCTGCTCGTTTGTGCCTGGAAGCTCCGCC AATGGACCTTTTCATGGAAGGTCTGCACCAGGTGGTGGCGGCTGATGAGCGCTGGATTCCAAAAGGGCCGAACACGTCTT TGTATATCCGTCCGACCTTGATTGGGTCTGAGCCGTTCCTGGGGGTTCGTCCTTCCCGTGAAACGTTGTTCTTTATTCTG TTGTCTCCGGTGGGTTCTTATTATTCTGAAGGCACAAAACCAATCAAGATTTGGACCGAGGAAAAGTACCTCCGTGCAGC TCCAGGGGGCCTGGGTGCGGTGAAGGCCGGGGCGAACTATGCCTCGAGTTTAAAGGCGGCCTTGGAAGCCAAGAAGAAGG GCTATGCCCAAGTTCTGTGGCTGGATGTCGAGCACCAGGGTATTGAGGAGGTCGGCACAATGAACGTGTTCTTCGTCTTC GATAATGAAATCGTCACGCCGGCATTGAATGGCAGCATTCTTTCTGGTGGCACCCGCGATGCGATTCTGCAGTTGTTGCG CTCTAAAAATCTGCCAGTGGTGGAAAGACGTATCACGATCACGGAAGTGGTGGATCGTCTGGCAAAAGGTGAATTGAAAG AAGCTTTCGGCACGGGTACGGCGGCGGTGATTTCCCCAGTGGGTGTTTTGCACTATCAGGGGAAAGACTGGACAATCAAC AACAACGAAAACGGACCTCTGAGCACACAGTTGTACAACGAGATAACGGCGATCCAGCGTGGCGCTCAAGCCGATACCTT GAACTGGCTTGTTCCTTTGAAGAAGTAA
Upstream 100 bases:
>100_bases AGATTGCAGGGCGTTAGCCGAGGCCGGGGACTGCCTGTCAAAATGTAAAAAAGGCCAATGGATGTTTGACCATTCCGACC ATGTTCGATAGGTCCTTTCT
Downstream 100 bases:
>100_bases TTTTTCAGGGATTTTGTCTTAAGAAATTCGTTCGCCAAAAAAAGTGCTAGCGAGGAATCGTCAGTGATAACTCGCTAGCT AAGGGGAATGAAACCAATCC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTTITKNLTNTPKALPPSDQLGFGQHFSDHMFVAKYTEGKGWSEASVVPYGPLSLDPGASVFHYGQALFEGMKAFRKESG EVVFFRPEFNYHRLAEGAARLCLEAPPMDLFMEGLHQVVAADERWIPKGPNTSLYIRPTLIGSEPFLGVRPSRETLFFIL LSPVGSYYSEGTKPIKIWTEEKYLRAAPGGLGAVKAGANYASSLKAALEAKKKGYAQVLWLDVEHQGIEEVGTMNVFFVF DNEIVTPALNGSILSGGTRDAILQLLRSKNLPVVERRITITEVVDRLAKGELKEAFGTGTAAVISPVGVLHYQGKDWTIN NNENGPLSTQLYNEITAIQRGAQADTLNWLVPLKK
Sequences:
>Translated_355_residues MTTITKNLTNTPKALPPSDQLGFGQHFSDHMFVAKYTEGKGWSEASVVPYGPLSLDPGASVFHYGQALFEGMKAFRKESG EVVFFRPEFNYHRLAEGAARLCLEAPPMDLFMEGLHQVVAADERWIPKGPNTSLYIRPTLIGSEPFLGVRPSRETLFFIL LSPVGSYYSEGTKPIKIWTEEKYLRAAPGGLGAVKAGANYASSLKAALEAKKKGYAQVLWLDVEHQGIEEVGTMNVFFVF DNEIVTPALNGSILSGGTRDAILQLLRSKNLPVVERRITITEVVDRLAKGELKEAFGTGTAAVISPVGVLHYQGKDWTIN NNENGPLSTQLYNEITAIQRGAQADTLNWLVPLKK >Mature_354_residues TTITKNLTNTPKALPPSDQLGFGQHFSDHMFVAKYTEGKGWSEASVVPYGPLSLDPGASVFHYGQALFEGMKAFRKESGE VVFFRPEFNYHRLAEGAARLCLEAPPMDLFMEGLHQVVAADERWIPKGPNTSLYIRPTLIGSEPFLGVRPSRETLFFILL SPVGSYYSEGTKPIKIWTEEKYLRAAPGGLGAVKAGANYASSLKAALEAKKKGYAQVLWLDVEHQGIEEVGTMNVFFVFD NEIVTPALNGSILSGGTRDAILQLLRSKNLPVVERRITITEVVDRLAKGELKEAFGTGTAAVISPVGVLHYQGKDWTINN NENGPLSTQLYNEITAIQRGAQADTLNWLVPLKK
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI38176287, Length=360, Percent_Identity=40.8333333333333, Blast_Score=261, Evalue=8e-70, Organism=Homo sapiens, GI296010906, Length=360, Percent_Identity=40.8333333333333, Blast_Score=261, Evalue=9e-70, Organism=Homo sapiens, GI296010904, Length=360, Percent_Identity=40.8333333333333, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI50658084, Length=356, Percent_Identity=37.6404494382022, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI296010900, Length=360, Percent_Identity=37.5, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI296010902, Length=360, Percent_Identity=37.5, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI258614015, Length=294, Percent_Identity=38.4353741496599, Blast_Score=205, Evalue=5e-53, Organism=Escherichia coli, GI48994963, Length=314, Percent_Identity=29.6178343949045, Blast_Score=99, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17568601, Length=345, Percent_Identity=38.8405797101449, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17565728, Length=350, Percent_Identity=32.8571428571429, Blast_Score=172, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6322002, Length=359, Percent_Identity=42.3398328690808, Blast_Score=269, Evalue=6e-73, Organism=Saccharomyces cerevisiae, GI6322608, Length=346, Percent_Identity=41.3294797687861, Blast_Score=264, Evalue=2e-71, Organism=Drosophila melanogaster, GI24641779, Length=343, Percent_Identity=41.1078717201166, Blast_Score=244, Evalue=7e-65,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39002; Mature: 38871
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITKNLTNTPKALPPSDQLGFGQHFSDHMFVAKYTEGKGWSEASVVPYGPLSLDPGAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH VFHYGQALFEGMKAFRKESGEVVFFRPEFNYHRLAEGAARLCLEAPPMDLFMEGLHQVVA HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ADERWIPKGPNTSLYIRPTLIGSEPFLGVRPSRETLFFILLSPVGSYYSEGTKPIKIWTE CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEC EKYLRAAPGGLGAVKAGANYASSLKAALEAKKKGYAQVLWLDVEHQGIEEVGTMNVFFVF CCEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCEEEEEEE DNEIVTPALNGSILSGGTRDAILQLLRSKNLPVVERRITITEVVDRLAKGELKEAFGTGT CCCEECCCCCCCEECCCCHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCC AAVISPVGVLHYQGKDWTINNNENGPLSTQLYNEITAIQRGAQADTLNWLVPLKK HHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC >Mature Secondary Structure TTITKNLTNTPKALPPSDQLGFGQHFSDHMFVAKYTEGKGWSEASVVPYGPLSLDPGAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCH VFHYGQALFEGMKAFRKESGEVVFFRPEFNYHRLAEGAARLCLEAPPMDLFMEGLHQVVA HHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ADERWIPKGPNTSLYIRPTLIGSEPFLGVRPSRETLFFILLSPVGSYYSEGTKPIKIWTE CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEC EKYLRAAPGGLGAVKAGANYASSLKAALEAKKKGYAQVLWLDVEHQGIEEVGTMNVFFVF CCEEECCCCCCCCHHCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCEEEEEEE DNEIVTPALNGSILSGGTRDAILQLLRSKNLPVVERRITITEVVDRLAKGELKEAFGTGT CCCEECCCCCCCEECCCCHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCC AAVISPVGVLHYQGKDWTINNNENGPLSTQLYNEITAIQRGAQADTLNWLVPLKK HHHHCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]