| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522658
Identifier: 42522658
GI number: 42522658
Start: 1044288
End: 1044785
Strand: Direct
Name: 42522658
Synonym: Bd1110
Alternate gene names: NA
Gene position: 1044288-1044785 (Clockwise)
Preceding gene: 42522657
Following gene: 42522659
Centisome position: 27.61
GC content: 49.0
Gene sequence:
>498_bases ATGTTGAAAGTTCTTCTGTTTTCCCTGATGGCCATGGCGCATTCCGATCACAGCGCGCACAATCAAAGTGCCCACGTTCA TGGCGCTGGCAAAGTCAGTCTGGCCTTTGATGGCAAAAAAGGAAAATTGGAGTTCCATGCTCCGGCGGAATCCATCTATG GATTTGAACACGCGGCCAAATCCAAAAAGGACAAGCAGAAAAAAGAAGCAGCTTTGTCCAAGCTTGGCGAAAAAATATCC GAGATGGTGGTTTTGGATCCTGCTTTGAAGTGTGAAATCAAACTGGACATGTACGAAGTCATCGAAAAGAAAAACCATTC CGACGTCGAAGGGGAGTTCAATATCTCCTGTGAAGCGCCGGTGGCAGGCAGTACCATCACGTTCAGTTTCCAGAAAGTCT TCCCGCGCCTGAAAAAGGTGCAGGTCGAAGTGCTGGCCGACCAGGTGCAAAAGTCCCTGGAGGTTGGCAAGAACGGAGAA ACTCTTGAGCTCAAGTGA
Upstream 100 bases:
>100_bases CTTTGAATCTAGTGACTAAGAAGTCTATGTACGGGGATGCCTCGTTCGAATTGATCGGAGAGGCGATCGAACCTTACAAA TAACTTTCAAGGAGGTCTTT
Downstream 100 bases:
>100_bases TCTGATCACCATCCGGGATTTGTCTTACACCTATGAAGGTCAGAAAAATCCCACGCTGCACGTTCCTGAATTTACGGTGA AAAAGGGCGAAGAGCTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLKVLLFSLMAMAHSDHSAHNQSAHVHGAGKVSLAFDGKKGKLEFHAPAESIYGFEHAAKSKKDKQKKEAALSKLGEKIS EMVVLDPALKCEIKLDMYEVIEKKNHSDVEGEFNISCEAPVAGSTITFSFQKVFPRLKKVQVEVLADQVQKSLEVGKNGE TLELK
Sequences:
>Translated_165_residues MLKVLLFSLMAMAHSDHSAHNQSAHVHGAGKVSLAFDGKKGKLEFHAPAESIYGFEHAAKSKKDKQKKEAALSKLGEKIS EMVVLDPALKCEIKLDMYEVIEKKNHSDVEGEFNISCEAPVAGSTITFSFQKVFPRLKKVQVEVLADQVQKSLEVGKNGE TLELK >Mature_165_residues MLKVLLFSLMAMAHSDHSAHNQSAHVHGAGKVSLAFDGKKGKLEFHAPAESIYGFEHAAKSKKDKQKKEAALSKLGEKIS EMVVLDPALKCEIKLDMYEVIEKKNHSDVEGEFNISCEAPVAGSTITFSFQKVFPRLKKVQVEVLADQVQKSLEVGKNGE TLELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18178; Mature: 18178
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVLLFSLMAMAHSDHSAHNQSAHVHGAGKVSLAFDGKKGKLEFHAPAESIYGFEHAAK CHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH SKKDKQKKEAALSKLGEKISEMVVLDPALKCEIKLDMYEVIEKKNHSDVEGEFNISCEAP HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEHHHHHHHCCCCCCCCCEEEEEECCC VAGSTITFSFQKVFPRLKKVQVEVLADQVQKSLEVGKNGETLELK CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MLKVLLFSLMAMAHSDHSAHNQSAHVHGAGKVSLAFDGKKGKLEFHAPAESIYGFEHAAK CHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHH SKKDKQKKEAALSKLGEKISEMVVLDPALKCEIKLDMYEVIEKKNHSDVEGEFNISCEAP HHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEHHHHHHHCCCCCCCCCEEEEEECCC VAGSTITFSFQKVFPRLKKVQVEVLADQVQKSLEVGKNGETLELK CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA