| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is sixA
Identifier: 42522571
GI number: 42522571
Start: 957113
End: 957619
Strand: Direct
Name: sixA
Synonym: Bd1011
Alternate gene names: NA
Gene position: 957113-957619 (Clockwise)
Preceding gene: 42522570
Following gene: 42522575
Centisome position: 25.3
GC content: 52.47
Gene sequence:
>507_bases GTGGAATTGATCATTATCCGTCACGCAGTGGCTGAAGACAAAGAAGAGTTCGCCAAAAAGGGCCAGGAGGACTACCTGCG TCCGCTGACCCTGAAGGGTCGCAAGCGCATGCAGAAGGTCTGCGTAAACCTGCGTGATTATGTGAAGGAAATCGACCTGA TTGTTTCAAGTCCATTGACCCGTGCGCGCCAGACGGCCGAGATCATCTCGCAGATTTACTATGAAACCAAAGTGGTCGAG GCACCTGAGTTGGTGCCGCACAGTCCTCCGCAGGCGTTCTTGAAATGGCTGCGTGTGCAGGGGCGCAATTACAAACGCAT CGCCGTTGTCGGCCATGAGCCGCACTTGAGCGTTTTTGCCAGTTATATGCTGTCTTTGAAGGCCGAGAGTTTTATTGATC TTAAGAAAAGCGGCATTATCGGTCTTGAGCTGGAGTCTTTTTCGTCAGCCGAAGCGGGCCGAGCACAGCTTTTGTACTCG ATCCCGCCCAAATTCCTGGCTGATTAA
Upstream 100 bases:
>100_bases GGTTTGCATCAAACCCTGATGCAAATTGCGAAAGCCCGGGTTACATTTGTGGATGAAAATACCAGTTCATCCACCAGTTC AAATTCGGAGTAGGGCCTAA
Downstream 100 bases:
>100_bases GGTGTGAATTTCAGGGACTTGAAGAACGCCTCGGAAGAGTCTTCGGCGTCGTTGGAGTCGTGCTGGATCGTGATGGCCAC GATTTCAAAGTCATTCACAT
Product: phosphohistidine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MELIIIRHAVAEDKEEFAKKGQEDYLRPLTLKGRKRMQKVCVNLRDYVKEIDLIVSSPLTRARQTAEIISQIYYETKVVE APELVPHSPPQAFLKWLRVQGRNYKRIAVVGHEPHLSVFASYMLSLKAESFIDLKKSGIIGLELESFSSAEAGRAQLLYS IPPKFLAD
Sequences:
>Translated_168_residues MELIIIRHAVAEDKEEFAKKGQEDYLRPLTLKGRKRMQKVCVNLRDYVKEIDLIVSSPLTRARQTAEIISQIYYETKVVE APELVPHSPPQAFLKWLRVQGRNYKRIAVVGHEPHLSVFASYMLSLKAESFIDLKKSGIIGLELESFSSAEAGRAQLLYS IPPKFLAD >Mature_168_residues MELIIIRHAVAEDKEEFAKKGQEDYLRPLTLKGRKRMQKVCVNLRDYVKEIDLIVSSPLTRARQTAEIISQIYYETKVVE APELVPHSPPQAFLKWLRVQGRNYKRIAVVGHEPHLSVFASYMLSLKAESFIDLKKSGIIGLELESFSSAEAGRAQLLYS IPPKFLAD
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 19156; Mature: 19156
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIIIRHAVAEDKEEFAKKGQEDYLRPLTLKGRKRMQKVCVNLRDYVKEIDLIVSSPLT CEEEEEHHHHHCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RARQTAEIISQIYYETKVVEAPELVPHSPPQAFLKWLRVQGRNYKRIAVVGHEPHLSVFA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH SYMLSLKAESFIDLKKSGIIGLELESFSSAEAGRAQLLYSIPPKFLAD HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEECCCCHHHCC >Mature Secondary Structure MELIIIRHAVAEDKEEFAKKGQEDYLRPLTLKGRKRMQKVCVNLRDYVKEIDLIVSSPLT CEEEEEHHHHHCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RARQTAEIISQIYYETKVVEAPELVPHSPPQAFLKWLRVQGRNYKRIAVVGHEPHLSVFA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH SYMLSLKAESFIDLKKSGIIGLELESFSSAEAGRAQLLYSIPPKFLAD HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]