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The map label for this gene is sndH

Identifier: 42522550

GI number: 42522550

Start: 934091

End: 935164

Strand: Direct

Name: sndH

Synonym: Bd0989

Alternate gene names: NA

Gene position: 934091-935164 (Clockwise)

Preceding gene: 42522549

Following gene: 42522551

Centisome position: 24.69

GC content: 54.84

Gene sequence:

>1074_bases
ATGAGAGCTGGTTTGGTATTTCTTGGATCGCTTTTGATTTCGCTTTCTGCGGGGGCGAAGCAACTTCCTTTGGAAAAGCT
GAAAATGCCTCCTGGGTTTCAGATTTCGGTGTGGGCTCAGGTGCCGGGGGCGCGGTCTTTGGCGCAGGCTCCGGATGGCC
GGATTTTTGTGGGCTCGCGTTCGGGTGACAAGGTTTATGTGGTGAAGGATGGCAAGACCAGCGTCTTTGCGCAGGGGCTG
GATACTCCGAACGGGGTTGCCTATAAAGACGGGAAACTTTATGTGGCCGAGATCGCGCGTATTCATGAATTTGATGCCAG
CCCTAATGTGAAGCTTCCGGCAAAACCCCTGCGCGCTTTGCCGCAGACTTTTCCTTCGGACACGCACCATGGCTGGAAAT
TCATCCGTTTTGGTCCGGACGGGAAGCTCTATGTCCCGGTGGGCGCCAACTGCAACATCTGTGATCCGGGGACAGATTAT
GCGCGCATCTATCGCATCGACGTGAATGGCACCAGCAAAGAGGAAGTGGCTTCCGGCGTGCGCAACACCGTGGGCTTTGA
TTTCCATCCGCAGTCGAAAGAGCTGTGGTTCACCGACAACGGTCGCGACTGGATGGGGGATGATCGTCCGCCCTGTGAAG
TGAACCGCTTGACCAAAACGGGCCAGAACTTCGGTTTCCCGTTTTGTCATGGCAAGGACACACTGGATCCTGATTTCGGC
AAAGGCAAAAAGTGTTCAGACTATGTGGCTCCGGTGGTGGAGCTGCGGGCTCACGTGGCACCTTTGGGTATGCGCTTTTA
CACGGGCACACAGTTCCCGGCGCAATATAAAGACAGCATCATTCTGGCAGAACACGGTTCCTGGAACCGCTCCACGCCAC
AAGGGTATCGTCTGACGTTTGTGAAATTGAATGGTTCTAATGTGGAAAAGACGGAGTCTTTCATCGAGGGCTGGCTGCAG
GGGGATTCCTCCTGGGGCCGTCCGGTTGACGTGGAAGTTCTGCCCGATGGGGCGATGCTGATTTCTGATGACAAGGCGGG
CGTGATTTACCGTCTGACGTACAAGGTAAAATAA

Upstream 100 bases:

>100_bases
GAGTGCCGCATGAATCGCATCTATGCTTACTTTGGGCATGAACACACTGAACCGTGTGGGAAATGCGATATCTGCAAACG
ATAGAACTGAGGAGGTTGTT

Downstream 100 bases:

>100_bases
TGCAGGGGAAGTTGCGATCTTCAGTGGACTTTCCCGATCCGCGCGAAACTCTGGCCGAAGGAATTCTGGCCATTGGCGGA
TCTTTGGATGTGGGCACGCT

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRAGLVFLGSLLISLSAGAKQLPLEKLKMPPGFQISVWAQVPGARSLAQAPDGRIFVGSRSGDKVYVVKDGKTSVFAQGL
DTPNGVAYKDGKLYVAEIARIHEFDASPNVKLPAKPLRALPQTFPSDTHHGWKFIRFGPDGKLYVPVGANCNICDPGTDY
ARIYRIDVNGTSKEEVASGVRNTVGFDFHPQSKELWFTDNGRDWMGDDRPPCEVNRLTKTGQNFGFPFCHGKDTLDPDFG
KGKKCSDYVAPVVELRAHVAPLGMRFYTGTQFPAQYKDSIILAEHGSWNRSTPQGYRLTFVKLNGSNVEKTESFIEGWLQ
GDSSWGRPVDVEVLPDGAMLISDDKAGVIYRLTYKVK

Sequences:

>Translated_357_residues
MRAGLVFLGSLLISLSAGAKQLPLEKLKMPPGFQISVWAQVPGARSLAQAPDGRIFVGSRSGDKVYVVKDGKTSVFAQGL
DTPNGVAYKDGKLYVAEIARIHEFDASPNVKLPAKPLRALPQTFPSDTHHGWKFIRFGPDGKLYVPVGANCNICDPGTDY
ARIYRIDVNGTSKEEVASGVRNTVGFDFHPQSKELWFTDNGRDWMGDDRPPCEVNRLTKTGQNFGFPFCHGKDTLDPDFG
KGKKCSDYVAPVVELRAHVAPLGMRFYTGTQFPAQYKDSIILAEHGSWNRSTPQGYRLTFVKLNGSNVEKTESFIEGWLQ
GDSSWGRPVDVEVLPDGAMLISDDKAGVIYRLTYKVK
>Mature_357_residues
MRAGLVFLGSLLISLSAGAKQLPLEKLKMPPGFQISVWAQVPGARSLAQAPDGRIFVGSRSGDKVYVVKDGKTSVFAQGL
DTPNGVAYKDGKLYVAEIARIHEFDASPNVKLPAKPLRALPQTFPSDTHHGWKFIRFGPDGKLYVPVGANCNICDPGTDY
ARIYRIDVNGTSKEEVASGVRNTVGFDFHPQSKELWFTDNGRDWMGDDRPPCEVNRLTKTGQNFGFPFCHGKDTLDPDFG
KGKKCSDYVAPVVELRAHVAPLGMRFYTGTQFPAQYKDSIILAEHGSWNRSTPQGYRLTFVKLNGSNVEKTESFIEGWLQ
GDSSWGRPVDVEVLPDGAMLISDDKAGVIYRLTYKVK

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 39351; Mature: 39351

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGLVFLGSLLISLSAGAKQLPLEKLKMPPGFQISVWAQVPGARSLAQAPDGRIFVGSR
CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCCCEEEEECC
SGDKVYVVKDGKTSVFAQGLDTPNGVAYKDGKLYVAEIARIHEFDASPNVKLPAKPLRAL
CCCEEEEEECCCCEEEEECCCCCCCEEEECCCEEEEEHHHHHHCCCCCCCCCCCHHHHHH
PQTFPSDTHHGWKFIRFGPDGKLYVPVGANCNICDPGTDYARIYRIDVNGTSKEEVASGV
HHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
RNTVGFDFHPQSKELWFTDNGRDWMGDDRPPCEVNRLTKTGQNFGFPFCHGKDTLDPDFG
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCC
KGKKCSDYVAPVVELRAHVAPLGMRFYTGTQFPAQYKDSIILAEHGSWNRSTPQGYRLTF
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
VKLNGSNVEKTESFIEGWLQGDSSWGRPVDVEVLPDGAMLISDDKAGVIYRLTYKVK
EEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEC
>Mature Secondary Structure
MRAGLVFLGSLLISLSAGAKQLPLEKLKMPPGFQISVWAQVPGARSLAQAPDGRIFVGSR
CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCCCEEEEECC
SGDKVYVVKDGKTSVFAQGLDTPNGVAYKDGKLYVAEIARIHEFDASPNVKLPAKPLRAL
CCCEEEEEECCCCEEEEECCCCCCCEEEECCCEEEEEHHHHHHCCCCCCCCCCCHHHHHH
PQTFPSDTHHGWKFIRFGPDGKLYVPVGANCNICDPGTDYARIYRIDVNGTSKEEVASGV
HHHCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
RNTVGFDFHPQSKELWFTDNGRDWMGDDRPPCEVNRLTKTGQNFGFPFCHGKDTLDPDFG
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCEECCCCCCCCCCC
KGKKCSDYVAPVVELRAHVAPLGMRFYTGTQFPAQYKDSIILAEHGSWNRSTPQGYRLTF
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEE
VKLNGSNVEKTESFIEGWLQGDSSWGRPVDVEVLPDGAMLISDDKAGVIYRLTYKVK
EEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]