| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522443
Identifier: 42522443
GI number: 42522443
Start: 818559
End: 819074
Strand: Direct
Name: 42522443
Synonym: Bd0871
Alternate gene names: NA
Gene position: 818559-819074 (Clockwise)
Preceding gene: 42522441
Following gene: 42522446
Centisome position: 21.64
GC content: 48.45
Gene sequence:
>516_bases TTGAGCAGTTCTAAAACGAAATCGACGCACGCTGAGCTAGATCACATCTTGAATTTTGTCGATGCCTCCAAGGGTCTTCG TGCGAAGATCAATGAGTCAGGTCGAGTGCAAATTCGTCAGGATCTAGACGGGAAATTATTCTCCTTCAACACTCAGGAAG TGAATGAAGTCCTTCACCGCGCAGACTCTGAAGGCAAACCCTTCATTCAGGTGAACTTCAAGAATGGCACAAAGGTGCTG TTGACTGAGACGCTGGTAGGATTCAAACCGCTGGAAACCCTGGGTTTGGATATGTCCCGCATCCCTAAAGTGGTGACGAC ACCAGATCTATTGAGTGTGTATGAGGCCATCGAAGAGTCCATGGGAGCCGACAACGGCCTGGATCACGAGGTTGAAATCC TCAAAAAGGTCTATACAGCCATCGTATCCGGAGGCGAAAAGGTCGGGTTCGACCTTAGTTTTGAAAGAAAGTGGCTCAAC AGACTGCTTGCGTCAAAATTCAAGGCTAGCGCCTAA
Upstream 100 bases:
>100_bases GGATTCTCATCTTTTTTTGTTTTCTTGTTAAGTCCTTCAAGGGATTGTCGATATCTCTAATGTAAGTTAGAGACGCCCTA TAATATTAGGGGAGGGTAAT
Downstream 100 bases:
>100_bases TCAATTGTATTTTCAAATACTTATCTAAGTTTTTTATTATAACCGAGGCCCCTGCCTCGGTTATTTATTGAGCAACTTCG GGTGAGTTATTAAATTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSSSKTKSTHAELDHILNFVDASKGLRAKINESGRVQIRQDLDGKLFSFNTQEVNEVLHRADSEGKPFIQVNFKNGTKVL LTETLVGFKPLETLGLDMSRIPKVVTTPDLLSVYEAIEESMGADNGLDHEVEILKKVYTAIVSGGEKVGFDLSFERKWLN RLLASKFKASA
Sequences:
>Translated_171_residues MSSSKTKSTHAELDHILNFVDASKGLRAKINESGRVQIRQDLDGKLFSFNTQEVNEVLHRADSEGKPFIQVNFKNGTKVL LTETLVGFKPLETLGLDMSRIPKVVTTPDLLSVYEAIEESMGADNGLDHEVEILKKVYTAIVSGGEKVGFDLSFERKWLN RLLASKFKASA >Mature_170_residues SSSKTKSTHAELDHILNFVDASKGLRAKINESGRVQIRQDLDGKLFSFNTQEVNEVLHRADSEGKPFIQVNFKNGTKVLL TETLVGFKPLETLGLDMSRIPKVVTTPDLLSVYEAIEESMGADNGLDHEVEILKKVYTAIVSGGEKVGFDLSFERKWLNR LLASKFKASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18983; Mature: 18852
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSKTKSTHAELDHILNFVDASKGLRAKINESGRVQIRQDLDGKLFSFNTQEVNEVLHR CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCEEECCHHHHHHHHHH ADSEGKPFIQVNFKNGTKVLLTETLVGFKPLETLGLDMSRIPKVVTTPDLLSVYEAIEES CCCCCCCEEEEEECCCCEEEEHHHHHCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHH MGADNGLDHEVEILKKVYTAIVSGGEKVGFDLSFERKWLNRLLASKFKASA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSKTKSTHAELDHILNFVDASKGLRAKINESGRVQIRQDLDGKLFSFNTQEVNEVLHR CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCEEECCHHHHHHHHHH ADSEGKPFIQVNFKNGTKVLLTETLVGFKPLETLGLDMSRIPKVVTTPDLLSVYEAIEES CCCCCCCEEEEEECCCCEEEEHHHHHCCCCHHHHCCCHHHCCCCCCCHHHHHHHHHHHHH MGADNGLDHEVEILKKVYTAIVSGGEKVGFDLSFERKWLNRLLASKFKASA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA