| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522429
Identifier: 42522429
GI number: 42522429
Start: 803223
End: 803891
Strand: Direct
Name: 42522429
Synonym: Bd0857
Alternate gene names: NA
Gene position: 803223-803891 (Clockwise)
Preceding gene: 42522428
Following gene: 42522430
Centisome position: 21.23
GC content: 47.38
Gene sequence:
>669_bases ATGAACGAATACGAAAAACTGATCGAAAAAATTCTTAACCACTTTGTCAGCGACGCATTCAAGGACGAATTGGCCATGGC CAAAAAAGAGTTCTTTGAAAACGCCGGTACTCTGGATGAAAACTCCGAGCACTATGAGTCTCGCATGGCGCAGTTCTACG ACTGGTATTTTTTCACCCGTGAACTGAAGGGTTTCGGTCAGACGCCGCTGGAGGCCTGCCTTCTGGTGCGTGAACTTCGT TTCTCTGAGGAAGAGCTGAAAACTCTGGAAGTGCTGAAGCAGCACCGCCATTCCATTTTCGAGTTTGTGAAAATCAAGGA CGGCGACGTCTATATCAAGGATATTCTGCAGAACAAAAAAGGCTTCTTCTCTTCCAACGTGATGGTGGTGAAGGCGTCTC CGTTTGTTTTCGGCTTTGACCAGGATGAGTTGTTTGAAGTGCGTTTGATCCCTCAGGGTGATTCCTATGTCTTCACCCGC GGCTTCTGCTTCCATCCTGAAAGTGCGAAGAAGTTCATTCTGAGCGAGGCCAAGCGTCATCGCAAAGATCCGGATCTGGA TCCGGATCTGCTGATGCTTCGCCTGATTAAAATGCGTTATAAATTTGAACAGTATAAACATGTGAAGCCTGAGCTCATTT ACTCCAATGAGGGGAAGCTCGGGATCTAG
Upstream 100 bases:
>100_bases GTGAAAAACGCAAGTGTTTAGGAATACAATATCACCCGGAAAGTTGTCCTGGGCCGCATGAGGCTTCAGGGCTGTTTAGC TACTTTGTAGAGCGGATGAT
Downstream 100 bases:
>100_bases TTCGAGGAGGAAAGAGTGCCGCGCAAGTCCAGTATTAAGAGAGTTCTTATTATCGGATCTGGACCCATCGTTATTGGACA AGCCTGTGAGTTTGATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI
Sequences:
>Translated_222_residues MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI >Mature_222_residues MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26414; Mature: 26414
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ELKGFGQTPLEACLLVRELRFSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKK HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTRGFCFHPESAKKFILSEAKRH CCCCCCEEEEEECCEEEECCCCCEEEEEEECCCCCEEEECCEEECCHHHHHHHHHHHHHC RKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ELKGFGQTPLEACLLVRELRFSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKK HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC GFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTRGFCFHPESAKKFILSEAKRH CCCCCCEEEEEECCEEEECCCCCEEEEEEECCCCCEEEECCEEECCHHHHHHHHHHHHHC RKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA