Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522429

Identifier: 42522429

GI number: 42522429

Start: 803223

End: 803891

Strand: Direct

Name: 42522429

Synonym: Bd0857

Alternate gene names: NA

Gene position: 803223-803891 (Clockwise)

Preceding gene: 42522428

Following gene: 42522430

Centisome position: 21.23

GC content: 47.38

Gene sequence:

>669_bases
ATGAACGAATACGAAAAACTGATCGAAAAAATTCTTAACCACTTTGTCAGCGACGCATTCAAGGACGAATTGGCCATGGC
CAAAAAAGAGTTCTTTGAAAACGCCGGTACTCTGGATGAAAACTCCGAGCACTATGAGTCTCGCATGGCGCAGTTCTACG
ACTGGTATTTTTTCACCCGTGAACTGAAGGGTTTCGGTCAGACGCCGCTGGAGGCCTGCCTTCTGGTGCGTGAACTTCGT
TTCTCTGAGGAAGAGCTGAAAACTCTGGAAGTGCTGAAGCAGCACCGCCATTCCATTTTCGAGTTTGTGAAAATCAAGGA
CGGCGACGTCTATATCAAGGATATTCTGCAGAACAAAAAAGGCTTCTTCTCTTCCAACGTGATGGTGGTGAAGGCGTCTC
CGTTTGTTTTCGGCTTTGACCAGGATGAGTTGTTTGAAGTGCGTTTGATCCCTCAGGGTGATTCCTATGTCTTCACCCGC
GGCTTCTGCTTCCATCCTGAAAGTGCGAAGAAGTTCATTCTGAGCGAGGCCAAGCGTCATCGCAAAGATCCGGATCTGGA
TCCGGATCTGCTGATGCTTCGCCTGATTAAAATGCGTTATAAATTTGAACAGTATAAACATGTGAAGCCTGAGCTCATTT
ACTCCAATGAGGGGAAGCTCGGGATCTAG

Upstream 100 bases:

>100_bases
GTGAAAAACGCAAGTGTTTAGGAATACAATATCACCCGGAAAGTTGTCCTGGGCCGCATGAGGCTTCAGGGCTGTTTAGC
TACTTTGTAGAGCGGATGAT

Downstream 100 bases:

>100_bases
TTCGAGGAGGAAAGAGTGCCGCGCAAGTCCAGTATTAAGAGAGTTCTTATTATCGGATCTGGACCCATCGTTATTGGACA
AGCCTGTGAGTTTGATTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR
FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR
GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI

Sequences:

>Translated_222_residues
MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR
FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR
GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI
>Mature_222_residues
MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTRELKGFGQTPLEACLLVRELR
FSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKKGFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTR
GFCFHPESAKKFILSEAKRHRKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26414; Mature: 26414

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ELKGFGQTPLEACLLVRELRFSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKK
HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
GFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTRGFCFHPESAKKFILSEAKRH
CCCCCCEEEEEECCEEEECCCCCEEEEEEECCCCCEEEECCEEECCHHHHHHHHHHHHHC
RKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MNEYEKLIEKILNHFVSDAFKDELAMAKKEFFENAGTLDENSEHYESRMAQFYDWYFFTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ELKGFGQTPLEACLLVRELRFSEEELKTLEVLKQHRHSIFEFVKIKDGDVYIKDILQNKK
HHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
GFFSSNVMVVKASPFVFGFDQDELFEVRLIPQGDSYVFTRGFCFHPESAKKFILSEAKRH
CCCCCCEEEEEECCEEEECCCCCEEEEEEECCCCCEEEECCEEECCHHHHHHHHHHHHHC
RKDPDLDPDLLMLRLIKMRYKFEQYKHVKPELIYSNEGKLGI
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA