| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is aprT
Identifier: 42522417
GI number: 42522417
Start: 793048
End: 793545
Strand: Direct
Name: aprT
Synonym: Bd0845
Alternate gene names: 42522417
Gene position: 793048-793545 (Clockwise)
Preceding gene: 42522416
Following gene: 42522418
Centisome position: 20.96
GC content: 52.21
Gene sequence:
>498_bases GTGGATTTAAAGAGCCTGATTCGTGATGTTCCTGATTTCCCCAAGCCAGGGATTATTTTCCGTGATATGTCCCCGCTGCT GCAAAACGCTGAAGCCCTCAGTTTTGTTTCCCACAATCTTTTAAAGCACGTCGATCTGACTCATGTGGATTATTTCGCCG GCATTGAATCCCGTGGATTTATCCTGGCAGCCCACATGGCGGCGACTCACAAAAAAGGCTTCCTGCCAATTCGTAAAGCG GGGAAGCTGCCGCCTCCGACGCGCAAGGTTTCCTATGCTCTGGAGTACGGTACAGCTGAAATTGAGCTTCCTCCGGGCCG CGGGAATGTGGTGATCGTGGATGATGTTCTGGCGACCGGTGGCACGCTGCAGGCGGCGATTGACCTCTGTCTGCTGGCCG GGTACTCCGTGGAGTCAGTGGCAGTTCTGGTCAATCTGACGTTCCTTAACAAGATGACCTACAACGATCAAAAGGTGGCT TCGCTTGTTCAATATTAA
Upstream 100 bases:
>100_bases CGCGCCTCTTTATTTTCCGGGCTTGATGGTGGAATAGATTTCCTTTACTCACAGCAGGGTTTCCCTTAAGAATAAGGGTG CAACTGCCAAGGAGTGGCCC
Downstream 100 bases:
>100_bases TGACGTGGCTTTGGTGATGGCGCTTCCGGGCGAGTCTCAGGGCTTCTTTGAAAAAGAAAATATCCCTGTGGTCTATACCG GCATTGGCAAAGTGAATGCC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MDLKSLIRDVPDFPKPGIIFRDMSPLLQNAEALSFVSHNLLKHVDLTHVDYFAGIESRGFILAAHMAATHKKGFLPIRKA GKLPPPTRKVSYALEYGTAEIELPPGRGNVVIVDDVLATGGTLQAAIDLCLLAGYSVESVAVLVNLTFLNKMTYNDQKVA SLVQY
Sequences:
>Translated_165_residues MDLKSLIRDVPDFPKPGIIFRDMSPLLQNAEALSFVSHNLLKHVDLTHVDYFAGIESRGFILAAHMAATHKKGFLPIRKA GKLPPPTRKVSYALEYGTAEIELPPGRGNVVIVDDVLATGGTLQAAIDLCLLAGYSVESVAVLVNLTFLNKMTYNDQKVA SLVQY >Mature_165_residues MDLKSLIRDVPDFPKPGIIFRDMSPLLQNAEALSFVSHNLLKHVDLTHVDYFAGIESRGFILAAHMAATHKKGFLPIRKA GKLPPPTRKVSYALEYGTAEIELPPGRGNVVIVDDVLATGGTLQAAIDLCLLAGYSVESVAVLVNLTFLNKMTYNDQKVA SLVQY
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=172, Percent_Identity=43.6046511627907, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI71773201, Length=122, Percent_Identity=47.5409836065574, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1786675, Length=149, Percent_Identity=39.5973154362416, Blast_Score=107, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17509087, Length=166, Percent_Identity=42.7710843373494, Blast_Score=116, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6323619, Length=124, Percent_Identity=35.4838709677419, Blast_Score=82, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320649, Length=141, Percent_Identity=35.4609929078014, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI17136334, Length=171, Percent_Identity=39.1812865497076, Blast_Score=97, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_BDEBA (Q6MPK7)
Other databases:
- EMBL: BX842648 - RefSeq: NP_967797.1 - ProteinModelPortal: Q6MPK7 - SMR: Q6MPK7 - GeneID: 2733916 - GenomeReviews: BX842601_GR - KEGG: bba:Bd0845 - NMPDR: fig|264462.1.peg.767 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: BBAC264462:BD0845-MONOMER - BRENDA: 2.4.2.7 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 18006; Mature: 18006
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKSLIRDVPDFPKPGIIFRDMSPLLQNAEALSFVSHNLLKHVDLTHVDYFAGIESRGF CCHHHHHHHCCCCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCE ILAAHMAATHKKGFLPIRKAGKLPPPTRKVSYALEYGTAEIELPPGRGNVVIVDDVLATG EEEEEHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCC GTLQAAIDLCLLAGYSVESVAVLVNLTFLNKMTYNDQKVASLVQY CHHHHHHHHHHHCCCCHHHHHHEEEHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MDLKSLIRDVPDFPKPGIIFRDMSPLLQNAEALSFVSHNLLKHVDLTHVDYFAGIESRGF CCHHHHHHHCCCCCCCCEEECCHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCE ILAAHMAATHKKGFLPIRKAGKLPPPTRKVSYALEYGTAEIELPPGRGNVVIVDDVLATG EEEEEHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCC GTLQAAIDLCLLAGYSVESVAVLVNLTFLNKMTYNDQKVASLVQY CHHHHHHHHHHHCCCCHHHHHHEEEHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA