Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522406

Identifier: 42522406

GI number: 42522406

Start: 778634

End: 780223

Strand: Direct

Name: 42522406

Synonym: Bd0831

Alternate gene names: NA

Gene position: 778634-780223 (Clockwise)

Preceding gene: 42522405

Following gene: 42522407

Centisome position: 20.58

GC content: 52.96

Gene sequence:

>1590_bases
ATGAAGAAATTATTACCTCTCCTGATTGCCGCAAGTATTGCAGTTCCGGTGGTGGGCGATGCCCAACAGCGAAAAACGCT
GAAAAAGCAGCCAGCTCCGGCACGTCGTGCAGCTCCGCTTGTATCGGGGAACACACGTGAAGCGACCCTCAGAAACCAAC
TCAGCAACGCCCTTCGTATGGCCCAAAGCGGGCAGTATGAATCCGCTGCCAATGCGCTGTTCTCGCTCAGCCGCCGTTCC
GAACTGGCTTCGGAGCGTCCGCAGATCAAGTACATCCTGGGCACCATGCTGGTTGAGCTGAAACTTTATCAGACGGCCGC
ATTCCAGTTCGTGGATGTGATCCGCATGAAACATCCCAAGTATTCCAAAATGGCGATCGAAAAGCTTTCGATCGTGGCGG
ACTCCCTGGGTGATGACACGATTCTGAACTACGCGATTTCCCGTGTGGACCTGAATGACTTCCCGGCGAATCTGCGTGAC
ATGATCAACTTCCGTTTGGGTGAAATCCGCCTGCGCAACCGCGAATTTGCCAAAGCCGCGGACCTGTTCAGCCGTGTTTC
TCCGACCAGCAGCTATTATTTCCAGGCTTTGTACGCCAAGGGTCTGGCAGAACTTGAAGCCAACCAGCCGTCTTTGGCTG
TGGGCACCTTCAACAAAATGCTCGATGCCCGCCGTCGCGCTCCGGTGACGGACACGAACAAAGTGGCCGCTCAAATGGGT
CTTGCCCGTGCCCTTTATCAAAAGCAGGATTGGGATGCTTCCGTGGAAGCCTATTCCCAGGTCCCTCGCGATACTTTGAT
GTGGCATGACGCGGTCTTTGAGCAGAGCTGGGCGATGCTGCGTGCGGCGCGCTTCCGTTCTTCTTTGAGTAACTTCCAAA
CTCTCCACTCGGCATATTACGAAGACTTCTATATGCCGGAGAGCTTGCTTTTGCGCTCGATCGTCTACCTGTACATCTGT
AAGTACGACGAGATGGAAAAGGTCCTAAGCCTGTTTGAAAAAACCTATGGCCCGGTCCGCTCCAAAATCGGTGACTTCCT
GAAGTCCTCCAACGAAGCCGGAACCTTCTATGCAGAGGTTGAAAAAGCCCACCTGATGAAGACCACGGACAAGTCGGCGA
ACCTGCGCCTGCCATACATCGTTCTAAGAAACGTGCTGGATCAGGGGGATGTGAAGCGTTCCATGCATTATCTGGAAAAG
CTGAACCAGGAAAAAGCGCGTGTGGAATCCAACTCCGCGTTCCGTGCTTCTCCGCTGGGTCAGTATTCCCTGAAGATCCT
TGCAAACCGCAGCAAGAACACCAAGTTCGCTATCGGCGACATGGTCAAGGCGCACTTGCTGAACATGCGTGTGGAACTGC
GTGACCTTTACGAACAGGCCGGATTCATCCGTTACGAGATGATCACGGGCCGCAAGGAAAGTATCAAAAAGAAAATCGCG
GGTAAAGACATCAGCGGTGACCAGATCGATGAAAACGTGAACCGCAAGTTCTACATCGAAAACGGTTATGAGTACTATCC
ATTCCAGGGTGAGTACTGGCTGGATGAAGTTGGAAACTACCACTACCTTGGAAAACAGAGCTGCGAGTAA

Upstream 100 bases:

>100_bases
ACTTCTTCAATGCCAAAGGCATCGACGGCTCGACAAATTCTTTCAACAACCTCTTCCTTACCGTGGGTATGAGTTGGTTC
TTCCCGGAGGCTAGTTACCG

Downstream 100 bases:

>100_bases
AGTATGAAAATCAACAGGCATCAACTTCTTGTTTCCGGATTTATGAGTCTTGTTCTGGCGTCCACTGCGGGCGCCCAGAC
CAAAACTGTTAAGACCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKKLLPLLIAASIAVPVVGDAQQRKTLKKQPAPARRAAPLVSGNTREATLRNQLSNALRMAQSGQYESAANALFSLSRRS
ELASERPQIKYILGTMLVELKLYQTAAFQFVDVIRMKHPKYSKMAIEKLSIVADSLGDDTILNYAISRVDLNDFPANLRD
MINFRLGEIRLRNREFAKAADLFSRVSPTSSYYFQALYAKGLAELEANQPSLAVGTFNKMLDARRRAPVTDTNKVAAQMG
LARALYQKQDWDASVEAYSQVPRDTLMWHDAVFEQSWAMLRAARFRSSLSNFQTLHSAYYEDFYMPESLLLRSIVYLYIC
KYDEMEKVLSLFEKTYGPVRSKIGDFLKSSNEAGTFYAEVEKAHLMKTTDKSANLRLPYIVLRNVLDQGDVKRSMHYLEK
LNQEKARVESNSAFRASPLGQYSLKILANRSKNTKFAIGDMVKAHLLNMRVELRDLYEQAGFIRYEMITGRKESIKKKIA
GKDISGDQIDENVNRKFYIENGYEYYPFQGEYWLDEVGNYHYLGKQSCE

Sequences:

>Translated_529_residues
MKKLLPLLIAASIAVPVVGDAQQRKTLKKQPAPARRAAPLVSGNTREATLRNQLSNALRMAQSGQYESAANALFSLSRRS
ELASERPQIKYILGTMLVELKLYQTAAFQFVDVIRMKHPKYSKMAIEKLSIVADSLGDDTILNYAISRVDLNDFPANLRD
MINFRLGEIRLRNREFAKAADLFSRVSPTSSYYFQALYAKGLAELEANQPSLAVGTFNKMLDARRRAPVTDTNKVAAQMG
LARALYQKQDWDASVEAYSQVPRDTLMWHDAVFEQSWAMLRAARFRSSLSNFQTLHSAYYEDFYMPESLLLRSIVYLYIC
KYDEMEKVLSLFEKTYGPVRSKIGDFLKSSNEAGTFYAEVEKAHLMKTTDKSANLRLPYIVLRNVLDQGDVKRSMHYLEK
LNQEKARVESNSAFRASPLGQYSLKILANRSKNTKFAIGDMVKAHLLNMRVELRDLYEQAGFIRYEMITGRKESIKKKIA
GKDISGDQIDENVNRKFYIENGYEYYPFQGEYWLDEVGNYHYLGKQSCE
>Mature_529_residues
MKKLLPLLIAASIAVPVVGDAQQRKTLKKQPAPARRAAPLVSGNTREATLRNQLSNALRMAQSGQYESAANALFSLSRRS
ELASERPQIKYILGTMLVELKLYQTAAFQFVDVIRMKHPKYSKMAIEKLSIVADSLGDDTILNYAISRVDLNDFPANLRD
MINFRLGEIRLRNREFAKAADLFSRVSPTSSYYFQALYAKGLAELEANQPSLAVGTFNKMLDARRRAPVTDTNKVAAQMG
LARALYQKQDWDASVEAYSQVPRDTLMWHDAVFEQSWAMLRAARFRSSLSNFQTLHSAYYEDFYMPESLLLRSIVYLYIC
KYDEMEKVLSLFEKTYGPVRSKIGDFLKSSNEAGTFYAEVEKAHLMKTTDKSANLRLPYIVLRNVLDQGDVKRSMHYLEK
LNQEKARVESNSAFRASPLGQYSLKILANRSKNTKFAIGDMVKAHLLNMRVELRDLYEQAGFIRYEMITGRKESIKKKIA
GKDISGDQIDENVNRKFYIENGYEYYPFQGEYWLDEVGNYHYLGKQSCE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60494; Mature: 60494

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLPLLIAASIAVPVVGDAQQRKTLKKQPAPARRAAPLVSGNTREATLRNQLSNALRM
CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
AQSGQYESAANALFSLSRRSELASERPQIKYILGTMLVELKLYQTAAFQFVDVIRMKHPK
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YSKMAIEKLSIVADSLGDDTILNYAISRVDLNDFPANLRDMINFRLGEIRLRNREFAKAA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHH
DLFSRVSPTSSYYFQALYAKGLAELEANQPSLAVGTFNKMLDARRRAPVTDTNKVAAQMG
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
LARALYQKQDWDASVEAYSQVPRDTLMWHDAVFEQSWAMLRAARFRSSLSNFQTLHSAYY
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDFYMPESLLLRSIVYLYICKYDEMEKVLSLFEKTYGPVRSKIGDFLKSSNEAGTFYAEV
HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH
EKAHLMKTTDKSANLRLPYIVLRNVLDQGDVKRSMHYLEKLNQEKARVESNSAFRASPLG
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QYSLKILANRSKNTKFAIGDMVKAHLLNMRVELRDLYEQAGFIRYEMITGRKESIKKKIA
HHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHC
GKDISGDQIDENVNRKFYIENGYEYYPFQGEYWLDEVGNYHYLGKQSCE
CCCCCCCHHHCCCCCEEEEECCEEECCCCCCHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MKKLLPLLIAASIAVPVVGDAQQRKTLKKQPAPARRAAPLVSGNTREATLRNQLSNALRM
CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHH
AQSGQYESAANALFSLSRRSELASERPQIKYILGTMLVELKLYQTAAFQFVDVIRMKHPK
HHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YSKMAIEKLSIVADSLGDDTILNYAISRVDLNDFPANLRDMINFRLGEIRLRNREFAKAA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCHHHHHHH
DLFSRVSPTSSYYFQALYAKGLAELEANQPSLAVGTFNKMLDARRRAPVTDTNKVAAQMG
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
LARALYQKQDWDASVEAYSQVPRDTLMWHDAVFEQSWAMLRAARFRSSLSNFQTLHSAYY
HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDFYMPESLLLRSIVYLYICKYDEMEKVLSLFEKTYGPVRSKIGDFLKSSNEAGTFYAEV
HHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH
EKAHLMKTTDKSANLRLPYIVLRNVLDQGDVKRSMHYLEKLNQEKARVESNSAFRASPLG
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QYSLKILANRSKNTKFAIGDMVKAHLLNMRVELRDLYEQAGFIRYEMITGRKESIKKKIA
HHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHC
GKDISGDQIDENVNRKFYIENGYEYYPFQGEYWLDEVGNYHYLGKQSCE
CCCCCCCHHHCCCCCEEEEECCEEECCCCCCHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA