Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is 42522369

Identifier: 42522369

GI number: 42522369

Start: 743016

End: 743468

Strand: Direct

Name: 42522369

Synonym: Bd0792

Alternate gene names: NA

Gene position: 743016-743468 (Clockwise)

Preceding gene: 42522368

Following gene: 42522370

Centisome position: 19.64

GC content: 51.21

Gene sequence:

>453_bases
CTGTCTTCTGTCGCGAATGCGTGGGAAGTGGACTTCTCCCGTCGTCAGGTAGAATTCAACAAGGTTAAAAATGAAGACCG
CCTGCCGGCCAGCGTGCAGGAGGATCAGTCCGTCAACATTCTTAGCAAGGTGTTTGATTCGGTTGAGCCGACTCAGGACA
TCGTGATCATGAATACGGAAAAAGGCTTCGTTCCTGCGCAGGTGCGCCTGAAAAAGGGCGGCAACTATCGCATTCACGTG
GTGAACGTGAACAACAAGGAAAAAAACGTCAGCTTCGTGCTGGATGCTTTCTCTGAGCATCACAACACGGTGTTTGGCGA
ACAGAAGACTTTCCATGTGACACCAAAAACGGACGGAATATTCTCTTACCAGTGTCCGGAAACGGCCGTGCAGGGGAAGT
TCATTATTTATTCCGATGCGGCAGCGCCTGATCGCATGCCGGCGTCCAAGTAA

Upstream 100 bases:

>100_bases
GATCCAAGATCCGTGAATTATATCGCTATGGAGGTGGCCCGTGAGTTTTGTGAGTTCCAGGATCGCACAGAGTTGCACTA
AGGTTCTTTGCCTGTTGTTG

Downstream 100 bases:

>100_bases
TTTTTTATCCGAGGAAAGGCACCCATGTCTGACCAGTCGAACGTTTTCAAACAGACCATTCAGCAGAATCTCGGTCCTGT
TGCGAAATACCTGGACGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSSVANAWEVDFSRRQVEFNKVKNEDRLPASVQEDQSVNILSKVFDSVEPTQDIVIMNTEKGFVPAQVRLKKGGNYRIHV
VNVNNKEKNVSFVLDAFSEHHNTVFGEQKTFHVTPKTDGIFSYQCPETAVQGKFIIYSDAAAPDRMPASK

Sequences:

>Translated_150_residues
MSSVANAWEVDFSRRQVEFNKVKNEDRLPASVQEDQSVNILSKVFDSVEPTQDIVIMNTEKGFVPAQVRLKKGGNYRIHV
VNVNNKEKNVSFVLDAFSEHHNTVFGEQKTFHVTPKTDGIFSYQCPETAVQGKFIIYSDAAAPDRMPASK
>Mature_149_residues
SSVANAWEVDFSRRQVEFNKVKNEDRLPASVQEDQSVNILSKVFDSVEPTQDIVIMNTEKGFVPAQVRLKKGGNYRIHVV
NVNNKEKNVSFVLDAFSEHHNTVFGEQKTFHVTPKTDGIFSYQCPETAVQGKFIIYSDAAAPDRMPASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16907; Mature: 16776

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVANAWEVDFSRRQVEFNKVKNEDRLPASVQEDQSVNILSKVFDSVEPTQDIVIMNTE
CCCCCCCEECCCCCCEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC
KGFVPAQVRLKKGGNYRIHVVNVNNKEKNVSFVLDAFSEHHNTVFGEQKTFHVTPKTDGI
CCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHCCCEECCCCEEEEECCCCCCE
FSYQCPETAVQGKFIIYSDAAAPDRMPASK
EEEECCCHHHCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SSVANAWEVDFSRRQVEFNKVKNEDRLPASVQEDQSVNILSKVFDSVEPTQDIVIMNTE
CCCCCCEECCCCCCEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC
KGFVPAQVRLKKGGNYRIHVVNVNNKEKNVSFVLDAFSEHHNTVFGEQKTFHVTPKTDGI
CCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEHHHHCCCEECCCCEEEEECCCCCCE
FSYQCPETAVQGKFIIYSDAAAPDRMPASK
EEEECCCHHHCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA