Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is doxD

Identifier: 42522347

GI number: 42522347

Start: 724217

End: 724678

Strand: Direct

Name: doxD

Synonym: Bd0765

Alternate gene names: NA

Gene position: 724217-724678 (Clockwise)

Preceding gene: 42522346

Following gene: 42522349

Centisome position: 19.14

GC content: 49.57

Gene sequence:

>462_bases
ATGAACGAACATCATAGAAAGGATTCCCTGATGAAAACACTGCTGAATAAACTGATTGCTCCCAGAAACTTCAATACCAA
GATGGATGATTTTGCGCTGACTGTTCTGCGCGTATTCATTGGTCTGACGATGGCGTTTTCTCACGGATTGGGGAAAATTC
CTCCTCCAGAAATGCTGGTGGAAGGTGTGCGTTCTATGGGCTTCCCGGCACCAGAACTCTTTGCGTGGTGTGCGGGCTTG
GCTGAATTTGCCGGCGGTATCTTGCTGGCATTGGGGTTGTTGACCCGTCCCGCAGCGGCTTTCATGGTTATCACCATGAT
CGTGGCGGTCTTTGGTGTTCATGCGGCTGATCCGTTTGGCCAAAAGGAAATGGGTCTGTTGTATCTGTTCACAGGTTTGT
TCTTTGTGTTGCACGGGGCAGGACGCTGGTCTGTTGACCATCTGATCACGAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
ACGGGCGCTGATTATGCCAATCCTGAAAAAGTTCCGCGCTTCTGCCCCCGAACTAAAGTAAAAAAAGGTTCTTGGTTCTT
TTTTAGGCCCACAGTGCATT

Downstream 100 bases:

>100_bases
TTCCTGATTCAAGGGAAACAAAAAAGGAGCCGCAAGGCTCCTTTTTTTTGCTATCCAGTGCCGCAAAGTTTTGTCTGCGG
CTTTGAGAGCATCGTTTTAT

Product: DoxD-like family protein

Products: NA

Alternate protein names: DoxX Family Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNEHHRKDSLMKTLLNKLIAPRNFNTKMDDFALTVLRVFIGLTMAFSHGLGKIPPPEMLVEGVRSMGFPAPELFAWCAGL
AEFAGGILLALGLLTRPAAAFMVITMIVAVFGVHAADPFGQKEMGLLYLFTGLFFVLHGAGRWSVDHLITKKK

Sequences:

>Translated_153_residues
MNEHHRKDSLMKTLLNKLIAPRNFNTKMDDFALTVLRVFIGLTMAFSHGLGKIPPPEMLVEGVRSMGFPAPELFAWCAGL
AEFAGGILLALGLLTRPAAAFMVITMIVAVFGVHAADPFGQKEMGLLYLFTGLFFVLHGAGRWSVDHLITKKK
>Mature_153_residues
MNEHHRKDSLMKTLLNKLIAPRNFNTKMDDFALTVLRVFIGLTMAFSHGLGKIPPPEMLVEGVRSMGFPAPELFAWCAGL
AEFAGGILLALGLLTRPAAAFMVITMIVAVFGVHAADPFGQKEMGLLYLFTGLFFVLHGAGRWSVDHLITKKK

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16799; Mature: 16799

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEHHRKDSLMKTLLNKLIAPRNFNTKMDDFALTVLRVFIGLTMAFSHGLGKIPPPEMLV
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EGVRSMGFPAPELFAWCAGLAEFAGGILLALGLLTRPAAAFMVITMIVAVFGVHAADPFG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QKEMGLLYLFTGLFFVLHGAGRWSVDHLITKKK
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNEHHRKDSLMKTLLNKLIAPRNFNTKMDDFALTVLRVFIGLTMAFSHGLGKIPPPEMLV
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
EGVRSMGFPAPELFAWCAGLAEFAGGILLALGLLTRPAAAFMVITMIVAVFGVHAADPFG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QKEMGLLYLFTGLFFVLHGAGRWSVDHLITKKK
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA