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The map label for this gene is ycgF [C]

Identifier: 42522346

GI number: 42522346

Start: 723749

End: 724177

Strand: Direct

Name: ycgF [C]

Synonym: Bd0763

Alternate gene names: 42522346

Gene position: 723749-724177 (Clockwise)

Preceding gene: 42522345

Following gene: 42522347

Centisome position: 19.13

GC content: 51.98

Gene sequence:

>429_bases
ATGAGCGAAATTTTCCACCTGGTCTACTTCAGCAAGGCGGCCGAGGATCTGAGCTATACGGACATCCGTGAGATCCTTGA
AGTCTCGCGCCGGAACAATGCCCGCCTGGGTATCACCGGTTTATTGATTTTCCGGGATGGTTTTTTTCTGCAGCTTCTTG
AAGGTGAGCAGGCGTCAGTGCACAAAATACTGGGTGCCATTCGTGAAGACGATCGCAATTATTCCGTCAAAGTATTGATT
GAAGCCAGCGGGCAGGAACGCCTTTTCGCGGAATGGTCCATGGCTTTTCATGATGGCGATATCACCACCGCGTCCAGTGG
GCATCTGGTGGAGCTGTTTGAATCCGTGGCCACCAGTGACCTGAGCAAACGGGCGCTGATTATGCCAATCCTGAAAAAGT
TCCGCGCTTCTGCCCCCGAACTAAAGTAA

Upstream 100 bases:

>100_bases
GCATCGCCACAGTTGAAACCAACGTGGCGAAAGTAAACGGCGATGTGGTGGTTAAGGGTGACGCTGTCATCATGATGTCC
TCCACTGGTCCCACCGGTAT

Downstream 100 bases:

>100_bases
AAAAAGGTTCTTGGTTCTTTTTTAGGCCCACAGTGCATTATGAACGAACATCATAGAAAGGATTCCCTGATGAAAACACT
GCTGAATAAACTGATTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: BLUF Domain Protein; Photopigment And Puc Activator; Sensors Of Blue-Light Using FAD Family; Expression Activator-Related Protein; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Superfamily; Transcription Regulator AraC Family; AppA Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSEIFHLVYFSKAAEDLSYTDIREILEVSRRNNARLGITGLLIFRDGFFLQLLEGEQASVHKILGAIREDDRNYSVKVLI
EASGQERLFAEWSMAFHDGDITTASSGHLVELFESVATSDLSKRALIMPILKKFRASAPELK

Sequences:

>Translated_142_residues
MSEIFHLVYFSKAAEDLSYTDIREILEVSRRNNARLGITGLLIFRDGFFLQLLEGEQASVHKILGAIREDDRNYSVKVLI
EASGQERLFAEWSMAFHDGDITTASSGHLVELFESVATSDLSKRALIMPILKKFRASAPELK
>Mature_141_residues
SEIFHLVYFSKAAEDLSYTDIREILEVSRRNNARLGITGLLIFRDGFFLQLLEGEQASVHKILGAIREDDRNYSVKVLIE
ASGQERLFAEWSMAFHDGDITTASSGHLVELFESVATSDLSKRALIMPILKKFRASAPELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16021; Mature: 15889

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIFHLVYFSKAAEDLSYTDIREILEVSRRNNARLGITGLLIFRDGFFLQLLEGEQASV
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCHHH
HKILGAIREDDRNYSVKVLIEASGQERLFAEWSMAFHDGDITTASSGHLVELFESVATSD
HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHEEECCCEEECCCCHHHHHHHHHHHCC
LSKRALIMPILKKFRASAPELK
CCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SEIFHLVYFSKAAEDLSYTDIREILEVSRRNNARLGITGLLIFRDGFFLQLLEGEQASV
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCHHH
HKILGAIREDDRNYSVKVLIEASGQERLFAEWSMAFHDGDITTASSGHLVELFESVATSD
HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHEEECCCEEECCCCHHHHHHHHHHHCC
LSKRALIMPILKKFRASAPELK
CCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA