| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522240
Identifier: 42522240
GI number: 42522240
Start: 604420
End: 605415
Strand: Direct
Name: 42522240
Synonym: Bd0652
Alternate gene names: NA
Gene position: 604420-605415 (Clockwise)
Preceding gene: 42522239
Following gene: 42522245
Centisome position: 15.98
GC content: 50.0
Gene sequence:
>996_bases ATGACTTTCCTTTTCCCCCTTGGGCAGGTACAACCTGCCGAAACTTTGGGGGATTTAATGACTAAAGGGCTTTTGTTCGC AGCTGTGCTGGGTCTTTCGTTGGCAGCCAACGCTCAGACTTCTTCTACCACTCTTTCCACTCCATCTGTGGAATCCGGAA CTCAGAAAACAACCACTTCTGTGGGTGATGTTCTGAAAAACAAAAAATTCGAAGACGACAAAGACATCACTGATTCCAAG TTGAAAGCGGAATCCGGTTCCTTGTCCCGTTATTCTTTGAAATTCTCTTTGTCTTACTTCGGTCCTCCAATTGGCGACCT TGACAGCAAACTTCAGCCAAATCCAGATGGTTCCATCGGTGTGAATCAGGTTTCCCTGAGCGGTTCCATCAGCGGTCGTT ACCGTTTGGATTCCAAAGCAGCGATCAGCGCGGGGACGGGCATCAACGTTCTGACTCCATTCCAGGGTGCTGAGCGCACG GATGTTAAAACTCCATTCATCAGCTATGACCGCAACGCGCGTTTGGGTGATGTTCAGGTTCGTAACTCTTACGGTGCTTC CCTGACCACGGTTCCAAACTTCCGTGAAGTGGGTCAGTACTCTTCTCTTTCTTACGACAACTCTCTGGTTTACAACATCG GGTCTTCCGGTGTGGCCGTGGGTCTGGATACGGGCCTGAGTGTGTTCCTGTATGAGCGCGGTTATGAGCCCAAAGACGGC AAAGCTTCCCGTTACCACCTGGGTTTCTACCCACAGGTGAAATACAACTTCTCTGACAAGCTGAACGTTTACACTTCTGT GGCGATGAACTTCTGGAATCCACGTTACCGTGACGGCGAGATGGATTTGCTGAACAAAACCCTGAGCGGCCGTGTGGGCA TGGGTTATGCGTTCTCTCGTGACATCTACTTTGCACCTTACCTGAATTACTACCCTAAGGATGCTCGTACAGAGTCCACG ACTCTGAGCTTCTCCACGATCTTCTCGATCCTGTAG
Upstream 100 bases:
>100_bases CATGACGGCGTCCGATGTGGTCGAATCTCTGCCCCAGGTGCTCTATAACTTACGTGAGGGATTTTAGAAAAAACTACCCG CCCCGTTCCATAACAAAAGC
Downstream 100 bases:
>100_bases TTTCAGACGGCATTTAAAAAACAAAAAAACCAGGGCGCCTTATTCGCTCTGGTTTTTTTATTTAATCACCAATCAAAAAT CTGATCTTGTCACTTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSVESGTQKTTTSVGDVLKNKKFEDDKDITDSK LKAESGSLSRYSLKFSLSYFGPPIGDLDSKLQPNPDGSIGVNQVSLSGSISGRYRLDSKAAISAGTGINVLTPFQGAERT DVKTPFISYDRNARLGDVQVRNSYGASLTTVPNFREVGQYSSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDG KASRYHLGFYPQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSRDIYFAPYLNYYPKDARTEST TLSFSTIFSIL
Sequences:
>Translated_331_residues MTFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSVESGTQKTTTSVGDVLKNKKFEDDKDITDSK LKAESGSLSRYSLKFSLSYFGPPIGDLDSKLQPNPDGSIGVNQVSLSGSISGRYRLDSKAAISAGTGINVLTPFQGAERT DVKTPFISYDRNARLGDVQVRNSYGASLTTVPNFREVGQYSSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDG KASRYHLGFYPQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSRDIYFAPYLNYYPKDARTEST TLSFSTIFSIL >Mature_330_residues TFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSVESGTQKTTTSVGDVLKNKKFEDDKDITDSKL KAESGSLSRYSLKFSLSYFGPPIGDLDSKLQPNPDGSIGVNQVSLSGSISGRYRLDSKAAISAGTGINVLTPFQGAERTD VKTPFISYDRNARLGDVQVRNSYGASLTTVPNFREVGQYSSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDGK ASRYHLGFYPQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSRDIYFAPYLNYYPKDARTESTT LSFSTIFSIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36132; Mature: 36001
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSVESGTQKTTTS CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHH VGDVLKNKKFEDDKDITDSKLKAESGSLSRYSLKFSLSYFGPPIGDLDSKLQPNPDGSIG HHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC VNQVSLSGSISGRYRLDSKAAISAGTGINVLTPFQGAERTDVKTPFISYDRNARLGDVQV EEEEEECCCCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCEEEE RNSYGASLTTVPNFREVGQYSSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDG ECCCCCEEEECCCHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCC KASRYHLGFYPQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSR CCCEEEECCCCEEEECCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEC DIYFAPYLNYYPKDARTESTTLSFSTIFSIL CEEEECCCCCCCCCCCCCCCEEEHHHHHHCC >Mature Secondary Structure TFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSVESGTQKTTTS EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHHHH VGDVLKNKKFEDDKDITDSKLKAESGSLSRYSLKFSLSYFGPPIGDLDSKLQPNPDGSIG HHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC VNQVSLSGSISGRYRLDSKAAISAGTGINVLTPFQGAERTDVKTPFISYDRNARLGDVQV EEEEEECCCCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCEEEE RNSYGASLTTVPNFREVGQYSSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDG ECCCCCEEEECCCHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCC KASRYHLGFYPQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSR CCCEEEECCCCEEEECCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEC DIYFAPYLNYYPKDARTESTTLSFSTIFSIL CEEEECCCCCCCCCCCCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA