| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522218
Identifier: 42522218
GI number: 42522218
Start: 585328
End: 585570
Strand: Direct
Name: 42522218
Synonym: Bd0628
Alternate gene names: NA
Gene position: 585328-585570 (Clockwise)
Preceding gene: 42522217
Following gene: 42522219
Centisome position: 15.47
GC content: 48.56
Gene sequence:
>243_bases ATGGCATCCCGGGCCTTTCTTAAATCTTTGGAGAAAGGCCAGATCCTGCGCGCCCAGGTGGAAGAGGTCACATCACCCAC CGAAGTTCTGTGTAACTTTCAAGGGGAGCTGCTTCTTATCTTTAATCACACGGTCAGCAAATTTAAAAAGAACGACCCTA TTTCCTTGCAGGTCCTCAGTATCAATCCCTTGAGATTTCAGGTGTTTTCCCCCTCCAGCCCCAAGTTTCAGCGGGTTGTG TAA
Upstream 100 bases:
>100_bases AGCCCCGGTTGAAAAGAAAAGACCGGTCCTGCACATCGGTGAACCAGAGATCCGTCCGGTTCAGTTCCGTCGTATTGATC TGGCGAAGGACTTGGACTAA
Downstream 100 bases:
>100_bases TTAGGTAAATCGGCCCTTTCAGACAAAAAACCCACAAAAGTGTCAACCAATACGCTGGAGTATCCAGGCCCTGTGTAATA AACCTCCGCCCATACAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MASRAFLKSLEKGQILRAQVEEVTSPTEVLCNFQGELLLIFNHTVSKFKKNDPISLQVLSINPLRFQVFSPSSPKFQRVV
Sequences:
>Translated_80_residues MASRAFLKSLEKGQILRAQVEEVTSPTEVLCNFQGELLLIFNHTVSKFKKNDPISLQVLSINPLRFQVFSPSSPKFQRVV >Mature_79_residues ASRAFLKSLEKGQILRAQVEEVTSPTEVLCNFQGELLLIFNHTVSKFKKNDPISLQVLSINPLRFQVFSPSSPKFQRVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9077; Mature: 8946
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRAFLKSLEKGQILRAQVEEVTSPTEVLCNFQGELLLIFNHTVSKFKKNDPISLQVLS CCCHHHHHHCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEEECCHHHHCCCCCCEEEEEE INPLRFQVFSPSSPKFQRVV ECCEEEEEECCCCCCCEECC >Mature Secondary Structure ASRAFLKSLEKGQILRAQVEEVTSPTEVLCNFQGELLLIFNHTVSKFKKNDPISLQVLS CCHHHHHHCCCCCHHHHHHHHCCCHHHEEECCCCCEEEEEECCHHHHCCCCCCEEEEEE INPLRFQVFSPSSPKFQRVV ECCEEEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA