Click here to switch to the map view.

The map label for this gene is 42522217

Identifier: 42522217

GI number: 42522217

Start: 584419

End: 585327

Strand: Direct

Name: 42522217

Synonym: Bd0627

Alternate gene names: NA

Gene position: 584419-585327 (Clockwise)

Preceding gene: 42522215

Following gene: 42522218

Centisome position: 15.45

GC content: 50.72

Gene sequence:

>909_bases
GTGAGCTTTTGGGTCTTGCTTCAAGTACTTGTGAATTTGATTTTGTTGGCGGGCGTTGTGGGTATGTGGGTGCGCTTGAA
CCGACCTCCTAAAGACGATCCAAGACTGAGCAAAGGTTTGCAGTTGCTGCAATCCAAGATCGCCGTTTTGGAAGACCTTT
CCGATCGCACCGAAACTCAGGTCAACCAGCTGACCGCGCTGCTTGAACAAAAAGTAAAAGACATCCAGGCCAAGATTCAG
GCTGCCGACAAACAAATCGGCAAGATCGACCAGAACATGCAAAAGAGCATGGAAGTAGCCAAGATCTTCCAGGATCGTAT
TCCCCACACGGAAATCATTGAACGCCAGAATACCGTAAAATATGTGAAGGCTGCGCGCATGGCCCATCAGGGTTCCAGCG
TGGATGAGATCGCCCGTGAAGTGGATCTGTCCCGCGGTGAAATTGAATTCATCGCCAAAGTGAATCGCGATCAGCTGATG
TTCTGCGAAGACAGCCTGCCAGAATGGGCGAACGAAGAAATGGAAGAATCCGCTCAATCCGACTTGAGCGACGTGGACAA
CATCAGCTTCATGACCCCGCTGCAAAGAGAAATCCCGATTGAAATCAGCACCGCTTTTGAGGTTCCAAAAACTGATCAGG
AAGCTTTGAAAAAATTGGGTGATGCCTTTAAAGCTGCCTGCAATGAAGTGAAAGCTGAAGAAGCCGCCGCTCAGCAGACC
GCGAACAACGTTTCGGCTTTGTTCAACGTGACCCAGAATATCGCGCAAACTTTCCTGAGCGAAAAGCCAACTCCGGCAGC
GCCGACCGCAGCCCCGGTTGAAAAGAAAAGACCGGTCCTGCACATCGGTGAACCAGAGATCCGTCCGGTTCAGTTCCGTC
GTATTGATCTGGCGAAGGACTTGGACTAA

Upstream 100 bases:

>100_bases
GGTCTAGGTCCTGCTTTGATACATTTAGGACCTTGGTCTCATTGTGAGACGGACCTTCGCCAGTCTAAAATAAATAACAG
AATAGCCGGGGAGGCCATGG

Downstream 100 bases:

>100_bases
ATGGCATCCCGGGCCTTTCTTAAATCTTTGGAGAAAGGCCAGATCCTGCGCGCCCAGGTGGAAGAGGTCACATCACCCAC
CGAAGTTCTGTGTAACTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSFWVLLQVLVNLILLAGVVGMWVRLNRPPKDDPRLSKGLQLLQSKIAVLEDLSDRTETQVNQLTALLEQKVKDIQAKIQ
AADKQIGKIDQNMQKSMEVAKIFQDRIPHTEIIERQNTVKYVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKVNRDQLM
FCEDSLPEWANEEMEESAQSDLSDVDNISFMTPLQREIPIEISTAFEVPKTDQEALKKLGDAFKAACNEVKAEEAAAQQT
ANNVSALFNVTQNIAQTFLSEKPTPAAPTAAPVEKKRPVLHIGEPEIRPVQFRRIDLAKDLD

Sequences:

>Translated_302_residues
MSFWVLLQVLVNLILLAGVVGMWVRLNRPPKDDPRLSKGLQLLQSKIAVLEDLSDRTETQVNQLTALLEQKVKDIQAKIQ
AADKQIGKIDQNMQKSMEVAKIFQDRIPHTEIIERQNTVKYVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKVNRDQLM
FCEDSLPEWANEEMEESAQSDLSDVDNISFMTPLQREIPIEISTAFEVPKTDQEALKKLGDAFKAACNEVKAEEAAAQQT
ANNVSALFNVTQNIAQTFLSEKPTPAAPTAAPVEKKRPVLHIGEPEIRPVQFRRIDLAKDLD
>Mature_301_residues
SFWVLLQVLVNLILLAGVVGMWVRLNRPPKDDPRLSKGLQLLQSKIAVLEDLSDRTETQVNQLTALLEQKVKDIQAKIQA
ADKQIGKIDQNMQKSMEVAKIFQDRIPHTEIIERQNTVKYVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKVNRDQLMF
CEDSLPEWANEEMEESAQSDLSDVDNISFMTPLQREIPIEISTAFEVPKTDQEALKKLGDAFKAACNEVKAEEAAAQQTA
NNVSALFNVTQNIAQTFLSEKPTPAAPTAAPVEKKRPVLHIGEPEIRPVQFRRIDLAKDLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33909; Mature: 33778

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFWVLLQVLVNLILLAGVVGMWVRLNRPPKDDPRLSKGLQLLQSKIAVLEDLSDRTETQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQLTALLEQKVKDIQAKIQAADKQIGKIDQNMQKSMEVAKIFQDRIPHTEIIERQNTVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKVNRDQLMFCEDSLPEWANEEMEESAQS
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH
DLSDVDNISFMTPLQREIPIEISTAFEVPKTDQEALKKLGDAFKAACNEVKAEEAAAQQT
HHHHHHCCHHHCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANNVSALFNVTQNIAQTFLSEKPTPAAPTAAPVEKKRPVLHIGEPEIRPVQFRRIDLAKD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHC
LD
CC
>Mature Secondary Structure 
SFWVLLQVLVNLILLAGVVGMWVRLNRPPKDDPRLSKGLQLLQSKIAVLEDLSDRTETQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQLTALLEQKVKDIQAKIQAADKQIGKIDQNMQKSMEVAKIFQDRIPHTEIIERQNTVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YVKAARMAHQGSSVDEIAREVDLSRGEIEFIAKVNRDQLMFCEDSLPEWANEEMEESAQS
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHH
DLSDVDNISFMTPLQREIPIEISTAFEVPKTDQEALKKLGDAFKAACNEVKAEEAAAQQT
HHHHHHCCHHHCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANNVSALFNVTQNIAQTFLSEKPTPAAPTAAPVEKKRPVLHIGEPEIRPVQFRRIDLAKD
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHC
LD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA