| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522210
Identifier: 42522210
GI number: 42522210
Start: 577701
End: 578384
Strand: Direct
Name: 42522210
Synonym: Bd0619
Alternate gene names: NA
Gene position: 577701-578384 (Clockwise)
Preceding gene: 42522209
Following gene: 42522211
Centisome position: 15.27
GC content: 48.39
Gene sequence:
>684_bases ATGGAGCGGTTTAAAGTCAGCGGAGACGATCTTCGCAATTTCTATAATGAAAATATTCCCTTAGCGCGTGTGTTCAGTGA TATCGAATCAGACCTGCGCCATACCAATCAGGTTGTTTGCCGTTACATCGTCAACGGCCTGGAAGTGGCTGAAGCCGATG AGGCGCGTTTTTCAACAGTGACTTTGGAGCAGATTGAAACTCTGGAGTACCTGACTGAAAACAGCCGCGATCTGACGGGC ATTGTTTTGCGCGGCTGGATTGAGGCGATGCCGGAACTGATTCAACAGACCGAAAACCTGGCCAAGCGCATGCGTGCTCA GGGCCTGAGCGGTCTTTTAAAATCCATTCACGATCTGGTTCACAATTGTGAGTTCCTGATCGACAGTGCCATGACGATCA AAGAAACCATGGGGGATCAGTTCTTTGGCGCCACGCCTCTGGACTGGGGCAAAACCGAAGCTGAGAGCAAAAGAACAGTT CTTGAGGCTTTGCGCGCTCTGGAAAATAAGGATTTTGTTCTTTTAGCGGATGTCCTGGAGTATGATTTAAACAATGTTCT TCAGATGTGGCTGGACCACCTGAAGGTGTTGGAGAAATCACTTAATGGCGAATACACAGGAAATCAGTTCGATTCCGAAC AAGCTCGATCCCATTCTATGGGTCGGAAACGTATCGCCAATTAG
Upstream 100 bases:
>100_bases CTCGAGGAAATCCGTACCGCAACATTGAATGTGCATGAGCGATTCAAACGCTACCTTCATGTATACATTCCGCATGAGGC ACTCAAGGAAGAGGCAGGCA
Downstream 100 bases:
>100_bases ACTTCCGCACTTTTTCCCGTTTCAAAAGCGGGAAGTGGAGATCATTTTCAGGGCCTCTATTACTGAGGCCCTTTTGCTTT TGCAGAATCAGCGCTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MERFKVSGDDLRNFYNENIPLARVFSDIESDLRHTNQVVCRYIVNGLEVAEADEARFSTVTLEQIETLEYLTENSRDLTG IVLRGWIEAMPELIQQTENLAKRMRAQGLSGLLKSIHDLVHNCEFLIDSAMTIKETMGDQFFGATPLDWGKTEAESKRTV LEALRALENKDFVLLADVLEYDLNNVLQMWLDHLKVLEKSLNGEYTGNQFDSEQARSHSMGRKRIAN
Sequences:
>Translated_227_residues MERFKVSGDDLRNFYNENIPLARVFSDIESDLRHTNQVVCRYIVNGLEVAEADEARFSTVTLEQIETLEYLTENSRDLTG IVLRGWIEAMPELIQQTENLAKRMRAQGLSGLLKSIHDLVHNCEFLIDSAMTIKETMGDQFFGATPLDWGKTEAESKRTV LEALRALENKDFVLLADVLEYDLNNVLQMWLDHLKVLEKSLNGEYTGNQFDSEQARSHSMGRKRIAN >Mature_227_residues MERFKVSGDDLRNFYNENIPLARVFSDIESDLRHTNQVVCRYIVNGLEVAEADEARFSTVTLEQIETLEYLTENSRDLTG IVLRGWIEAMPELIQQTENLAKRMRAQGLSGLLKSIHDLVHNCEFLIDSAMTIKETMGDQFFGATPLDWGKTEAESKRTV LEALRALENKDFVLLADVLEYDLNNVLQMWLDHLKVLEKSLNGEYTGNQFDSEQARSHSMGRKRIAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26002; Mature: 26002
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFKVSGDDLRNFYNENIPLARVFSDIESDLRHTNQVVCRYIVNGLEVAEADEARFSTV CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEQIETLEYLTENSRDLTGIVLRGWIEAMPELIQQTENLAKRMRAQGLSGLLKSIHDLV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNCEFLIDSAMTIKETMGDQFFGATPLDWGKTEAESKRTVLEALRALENKDFVLLADVLE HHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHH YDLNNVLQMWLDHLKVLEKSLNGEYTGNQFDSEQARSHSMGRKRIAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MERFKVSGDDLRNFYNENIPLARVFSDIESDLRHTNQVVCRYIVNGLEVAEADEARFSTV CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLEQIETLEYLTENSRDLTGIVLRGWIEAMPELIQQTENLAKRMRAQGLSGLLKSIHDLV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNCEFLIDSAMTIKETMGDQFFGATPLDWGKTEAESKRTVLEALRALENKDFVLLADVLE HHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHH YDLNNVLQMWLDHLKVLEKSLNGEYTGNQFDSEQARSHSMGRKRIAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA