Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522200

Identifier: 42522200

GI number: 42522200

Start: 565438

End: 567585

Strand: Direct

Name: 42522200

Synonym: Bd0607

Alternate gene names: NA

Gene position: 565438-567585 (Clockwise)

Preceding gene: 42522199

Following gene: 42522202

Centisome position: 14.95

GC content: 50.0

Gene sequence:

>2148_bases
ATGCTGTCCTGGAGCCGTTCTACATTTGCCATGCTTCTTTGCTCATCCATGCTTGTGGCCTGTACGAAAGAGACTGAAAA
AGTCATCGTGAAAGAAGCCCTGCCTCCCGCAAAGATCGAAGCTTCGGCTAAGGTCAGTAAGAACCTTGTGACCTTTGAAA
AGTCGTCTTTGGGCAAACTCTTCATGCTGGTTCCCACGGCCATCGATTCCTCCCGGTCCGCCGCTCCCAGTTTCTTTCGC
CCCCAGTTGATTTCCTTTGAAAGACAAGGCGATCGCATCGCGGTCTTCAATCAGACGGTCAAAGACGTCGTCGAGACGGT
CACGGCCGATCAGCTTATTCAGAGTTTTGCGGTCGTTGATGAAACCACCGAGCAGATCGTTTTTGACCTGGGTCAGGGAT
TCCTGTCCATGAATCTTCAGGACGCCATGGATATCGTTTTGCCATACACGTATTCTGATGTGATTGAAAAAGGGGAGCGT
AAACTGGAATCCCATCTGGATATCAAGGATTCCTATGTTAGTTCTCTTTCCCTGCGTAACAATTCCATTCTGATCAAGCA
GGTGATCCGCATCGTGGAAAAAGCGCGTCCTTCTGGTGGAGGGAACAAAGAGGCCGAAGAAAAGTTGAAACAGATCGGCA
TGCAAAAGCCTGAGAAGTTCGAGACCAGCAAGACTCTGTTCTTTGAAATCAAGCCTTACGTGCAAAACGAATATTTCAAG
TCCAAGCCCATGGACGCCCAGAACCGCTTTGGCTTCTTCGTTAACAACACCTTCAAAAAAGGTGAAGACAATATGAAAAC
CCAGATCGCACGCTGGAGCATCGACGAAAAAGACGGCGATATCCGTGTGTTGATTGATGCCAACGTTCCTCAGAAAATGG
AAGCTGCCGTCAGGGAAGGCGTGACCTATTGGAACCGCGTTCTAGGCCGTGACATTCTGAAAGTTGAGACCGGTTACAAG
GATTCAGACCCACAAACGGACCGCTCGATCGTGATCCGCTGGATTCACTGGGATCACGGGTTTGGAGCCTATGCCAATGC
CCAGATGGATCCTCTGACGGGAGAAGCCTTCCGTGGTTTTGTCTATATGACATCGTCCTTCACGAAAAAAGACGACATGA
AGCCTGATAACGGCGGCGGAGTTTTTTCTTTCAAGCACGGTGATCTGTGTGGGATGAGAATGGACATGGACCCGTCAGAC
CAGGAAGACTCTGTGCGCGCGGTGATAGCTCACGAGATGGGGCACGTTCTGGGGCTTCGTCACAACTTTGCCGGCAGTTC
CTCGACCGAACATACGGATGCTGAAATCAAAGAGGCAATCAATCAGCGCAAAAATGGAAATCTGGTCGCAGAAAAGTCCG
TAGTGACGACCGTGATGGACTATACTGACGACGTGGCTTCTTTGGTTTCGGGTGCCTTCATCAAGGACAATGTCATGCCC
TATGACAAGAAGGCCATTGATTGGGCTTATAAGGATGTCGATTCCGCAAAGATCAAAGGCATGTACTGCTCAGATGAGCA
CATTTTGGATGCGGGAGCCGGCGGACGAAATATTATTGGATGTGAACGTCAGGACCTGTACCGCAATGTCTTCTTTGCAG
AGAGAGAAAGAATCCTGGCGACTGCAAAAGACACTTTGAACAGCACGATCACCTCTCTGGAATACATGAAAAAAGCCGGA
TACAAAATTGAGCACAAAGCCTATGTGCAGATGACTTTCAGTCCGACCCTGGAGATTGCCGAATCCCTGTATAAGAGCGA
CAAGAAGAATCCGTTGCTGACAATTGCTGATGTGGTCGAGGACTTCCTGTCTCCATACATGCGTTGGGGCTACAACGCCA
AGGACTATGGGAATGGATCCATGAACGGAGATGCCGAGGTCAATGAACAGCTGAAAGAAATGGGCGGATTGACGGCTTAC
CTGAGGACGCTGAGCCCGACTTCTGACGATCCGGAGTACTTCCAGAAGCTGGCCAAAGAAGCTCTGGCCGCTGGAAAGTT
TGACAACATAGGTCTGACCCCTGAAGAGCTTCAGGTGGTCAAAGAAGGTCTTCTGGAAAACTCTGCAAAGCTTGATGCAG
AGGCTGCAGACCTTGCTTTGAAAGCCGTGGACGTCAGCAGGCTTCGCGACACCATCACTAGCCGGTAG

Upstream 100 bases:

>100_bases
CCTGTTGAGTTGGATATGGTGTCCGGCTCAGACCCAATTTTGGGTTCGCTGTCTCTTTTTTAGACGGCGGCAAGTGGTTT
AAATCGATTTGGGAGTACGT

Downstream 100 bases:

>100_bases
TCAGCATCCCGCTGGCGATCCCCGTGACGGTTTCCCTGAGCAGCTTGATGTCCGTGGTTTCCAGGGCCACCAGCTGCAAG
ACGTTCAGCGGGTGAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 715; Mature: 715

Protein sequence:

>715_residues
MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR
PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER
KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK
SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK
DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD
QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP
YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG
YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY
LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR

Sequences:

>Translated_715_residues
MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR
PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER
KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK
SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK
DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD
QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP
YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG
YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY
LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR
>Mature_715_residues
MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKLFMLVPTAIDSSRSAAPSFFR
PQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVDETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGER
KLESHLDIKDSYVSSLSLRNNSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK
SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREGVTYWNRVLGRDILKVETGYK
DSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGFVYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSD
QEDSVRAVIAHEMGHVLGLRHNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP
YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILATAKDTLNSTITSLEYMKKAG
YKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVEDFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAY
LRTLSPTSDDPEYFQKLAKEALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80091; Mature: 80091

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCEE
FMLVPTAIDSSRSAAPSFFRPQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVD
EEEEEHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGERKLESHLDIKDSYVSSLSLRN
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
NSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEEECHHHHCHHHC
SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREG
CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH
VTYWNRVLGRDILKVETGYKDSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGF
HHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCE
VYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSDQEDSVRAVIAHEMGHVLGLR
EEEECCCCCCCCCCCCCCCCEEEECCCCEECEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP
HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILA
CCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TAKDTLNSTITSLEYMKKAGYKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVE
HHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEECCHHHHHHHHHHCCCCCCCEEHHHHHH
DFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAYLRTLSPTSDDPEYFQKLAKE
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHH
ALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSWSRSTFAMLLCSSMLVACTKETEKVIVKEALPPAKIEASAKVSKNLVTFEKSSLGKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEECCCCCEE
FMLVPTAIDSSRSAAPSFFRPQLISFERQGDRIAVFNQTVKDVVETVTADQLIQSFAVVD
EEEEEHHCCCCCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ETTEQIVFDLGQGFLSMNLQDAMDIVLPYTYSDVIEKGERKLESHLDIKDSYVSSLSLRN
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
NSILIKQVIRIVEKARPSGGGNKEAEEKLKQIGMQKPEKFETSKTLFFEIKPYVQNEYFK
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHCCCCEEEEEECHHHHCHHHC
SKPMDAQNRFGFFVNNTFKKGEDNMKTQIARWSIDEKDGDIRVLIDANVPQKMEAAVREG
CCCCCCHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH
VTYWNRVLGRDILKVETGYKDSDPQTDRSIVIRWIHWDHGFGAYANAQMDPLTGEAFRGF
HHHHHHHHCCHHEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCE
VYMTSSFTKKDDMKPDNGGGVFSFKHGDLCGMRMDMDPSDQEDSVRAVIAHEMGHVLGLR
EEEECCCCCCCCCCCCCCCCEEEECCCCEECEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HNFAGSSSTEHTDAEIKEAINQRKNGNLVAEKSVVTTVMDYTDDVASLVSGAFIKDNVMP
HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
YDKKAIDWAYKDVDSAKIKGMYCSDEHILDAGAGGRNIIGCERQDLYRNVFFAERERILA
CCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TAKDTLNSTITSLEYMKKAGYKIEHKAYVQMTFSPTLEIAESLYKSDKKNPLLTIADVVE
HHHHHHHHHHHHHHHHHHCCCEEECEEEEEEEECCHHHHHHHHHHCCCCCCCEEHHHHHH
DFLSPYMRWGYNAKDYGNGSMNGDAEVNEQLKEMGGLTAYLRTLSPTSDDPEYFQKLAKE
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHH
ALAAGKFDNIGLTPEELQVVKEGLLENSAKLDAEAADLALKAVDVSRLRDTITSR
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA