| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is fer
Identifier: 42522184
GI number: 42522184
Start: 548504
End: 548737
Strand: Direct
Name: fer
Synonym: Bd0590
Alternate gene names: NA
Gene position: 548504-548737 (Clockwise)
Preceding gene: 42522178
Following gene: 42522185
Centisome position: 14.5
GC content: 52.56
Gene sequence:
>234_bases ATGGCAGAGAAAAGTCAGTCTTGGAAAGAAAATAAGCCCGGCAAGATGTTCGTGGATCAGTCTTGCATTGCTTGTGATGC CTGCGTTCTGACGGCGCCTAAGAATTTCTCCATGCATGAGGAAGACGGCCACGCGTTCGTATCCCGCCAGCCGGAAACTC CGGAAGAAGAAGCTCTGTGCAAAGAGGCCATGGAAGGTTGCCCGGTTGAGGCAATCGGAAACGATGGCGAGTAA
Upstream 100 bases:
>100_bases TAGGACGGCCTGAAAAATGCGACCCAAGTCGGGAAGGGGGTTTGACATCAAGGGCAAAAGCCTTATATTAAGGCGGCTTG GCCCCCCTAAGGAGTTTGTG
Downstream 100 bases:
>100_bases GCAGTCTCCTGCCAAAAAGCCCTCTGCCAAGCAGGCGGGCATTCTTGCAACTATTGAACTTCTCAAGAGATATTACCCTG ACGCTTATTGCGCCCTGAAT
Product: putative ferredoxin
Products: NA
Alternate protein names: Zn-Dependent Hydrolase Glyoxylase Family
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MAEKSQSWKENKPGKMFVDQSCIACDACVLTAPKNFSMHEEDGHAFVSRQPETPEEEALCKEAMEGCPVEAIGNDGE
Sequences:
>Translated_77_residues MAEKSQSWKENKPGKMFVDQSCIACDACVLTAPKNFSMHEEDGHAFVSRQPETPEEEALCKEAMEGCPVEAIGNDGE >Mature_76_residues AEKSQSWKENKPGKMFVDQSCIACDACVLTAPKNFSMHEEDGHAFVSRQPETPEEEALCKEAMEGCPVEAIGNDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8448; Mature: 8317
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 11.7 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 10.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKSQSWKENKPGKMFVDQSCIACDACVLTAPKNFSMHEEDGHAFVSRQPETPEEEALC CCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCHHHHHH KEAMEGCPVEAIGNDGE HHHHHCCCEECCCCCCC >Mature Secondary Structure AEKSQSWKENKPGKMFVDQSCIACDACVLTAPKNFSMHEEDGHAFVSRQPETPEEEALC CCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCHHHHHH KEAMEGCPVEAIGNDGE HHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA