Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522169

Identifier: 42522169

GI number: 42522169

Start: 529926

End: 530951

Strand: Direct

Name: 42522169

Synonym: Bd0573

Alternate gene names: NA

Gene position: 529926-530951 (Clockwise)

Preceding gene: 42522168

Following gene: 42522170

Centisome position: 14.01

GC content: 51.95

Gene sequence:

>1026_bases
GTGCCTGAAGCCCACTGGAAGCTGACAGAGGTCCCCGTAATCCAAGGCCCCATGGCGGGAGGCTACACCACAGCCGAGCT
GGTTTCTGCTGTCAGTAACAGCGGGGGGCTGGGCTCGATCGGTGCTGGATACATGTCACCGGATTCCTTGCGCTTGCTCA
TTCAAAAAGTAAAAAATTTGACCACAAGACCTTTTGCGGTGAATCTGTTCATTCCAACGTCCCCGGCGGTGGATCTGCTG
CAGGTCGAAAGAATGAAGAAACTTCTGCTGCCATTCTATCGGGAACTGGGGATGGATTCCGTTCCTGAGCTTTCCTATGA
CCCTGATCTTTTCCAAAAACAATTTGCCGTTGTGCTGGAAGAAAAAGTCCCTGCTTTCAGTTTCACCTTCGGGTGCCTGA
AGCCGTCAGAGATGGCGGCGCTGAAATCTCTGAACGTGTTTGTCATGGGGACTGCCACCAGTTTGGAAGAGGCAGAGTAT
TTGCAAAAGCAGGGTTGTGATGCGGTGGTGGCGCAGGGCCTGGAGGCCGGAGGTCATCGCGGGTCTTTTTTGGATGGAAA
GTTTCCGCTGTTGCCTGCGAAAAATCTGGTTCAGGAGATATCGGAAAGGTTTCAGATCCCGGTGATCGCCGCTGGTGGAA
TTGTGAGCAAAGCAGACATGCAAACGATGCTTTCTGCCGGTGCGGTTGCGGTTCAAATCGGCACGGCTTTCCTGGTCTGT
CACGAAAGCGGAGCTTCACAGGAATACCGGGACCTTTTGCTCAAAGGAAAACCCAAAGATACAGAACTAATTAAAGTCTT
CAGTGGTCGCTGGTCTCGAGGATTGAGCAATCGGTTTTCCCGGGAAATGAAAATTCACGAAACTGATACTCCGGACTATC
CAATTCAACACTGGCTGACGACTCCGTTGCGAAAAAAAGCGCAGGAAAGCGGTCGTCCTGAGTTTCAGTCACTGTGGTCA
GGACAAGGTTTGGGCTCTCTGAGGGCGTGTTCTGTGGCTGAGTATATGGCCACATTAAGTCGGTAG

Upstream 100 bases:

>100_bases
GTCTGTGGTGCCGACCCTTGCCGATGTGGAATGAAATTGTTGAAGTTGAAGGGCAGAAAGTTCCGCGTTTCAAATTCCTG
TTCAAGTAACGAGGTCAATT

Downstream 100 bases:

>100_bases
AATTTTCAGATTATTCAGGAGTTTCCGCCACCTAGGGTGGGGTTATCAGTAAGCTTTCAGTTGGCGTTCAAGGCCTTCTC
ATTTATCGCTAAATAAGGTG

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPEAHWKLTEVPVIQGPMAGGYTTAELVSAVSNSGGLGSIGAGYMSPDSLRLLIQKVKNLTTRPFAVNLFIPTSPAVDLL
QVERMKKLLLPFYRELGMDSVPELSYDPDLFQKQFAVVLEEKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEY
LQKQGCDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTMLSAGAVAVQIGTAFLVC
HESGASQEYRDLLLKGKPKDTELIKVFSGRWSRGLSNRFSREMKIHETDTPDYPIQHWLTTPLRKKAQESGRPEFQSLWS
GQGLGSLRACSVAEYMATLSR

Sequences:

>Translated_341_residues
MPEAHWKLTEVPVIQGPMAGGYTTAELVSAVSNSGGLGSIGAGYMSPDSLRLLIQKVKNLTTRPFAVNLFIPTSPAVDLL
QVERMKKLLLPFYRELGMDSVPELSYDPDLFQKQFAVVLEEKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEY
LQKQGCDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTMLSAGAVAVQIGTAFLVC
HESGASQEYRDLLLKGKPKDTELIKVFSGRWSRGLSNRFSREMKIHETDTPDYPIQHWLTTPLRKKAQESGRPEFQSLWS
GQGLGSLRACSVAEYMATLSR
>Mature_340_residues
PEAHWKLTEVPVIQGPMAGGYTTAELVSAVSNSGGLGSIGAGYMSPDSLRLLIQKVKNLTTRPFAVNLFIPTSPAVDLLQ
VERMKKLLLPFYRELGMDSVPELSYDPDLFQKQFAVVLEEKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEYL
QKQGCDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTMLSAGAVAVQIGTAFLVCH
ESGASQEYRDLLLKGKPKDTELIKVFSGRWSRGLSNRFSREMKIHETDTPDYPIQHWLTTPLRKKAQESGRPEFQSLWSG
QGLGSLRACSVAEYMATLSR

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=362, Percent_Identity=28.4530386740331, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 37250; Mature: 37119

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAHWKLTEVPVIQGPMAGGYTTAELVSAVSNSGGLGSIGAGYMSPDSLRLLIQKVKNL
CCCCCCEEECCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
TTRPFAVNLFIPTSPAVDLLQVERMKKLLLPFYRELGMDSVPELSYDPDLFQKQFAVVLE
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
EKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEYLQKQGCDAVVAQGLEAGGHR
HCCCCEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
GSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTMLSAGAVAVQIGTAFLVC
CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCEEEEECEEEEEE
HESGASQEYRDLLLKGKPKDTELIKVFSGRWSRGLSNRFSREMKIHETDTPDYPIQHWLT
ECCCCCHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHC
TPLRKKAQESGRPEFQSLWSGQGLGSLRACSVAEYMATLSR
CHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEAHWKLTEVPVIQGPMAGGYTTAELVSAVSNSGGLGSIGAGYMSPDSLRLLIQKVKNL
CCCCCEEECCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
TTRPFAVNLFIPTSPAVDLLQVERMKKLLLPFYRELGMDSVPELSYDPDLFQKQFAVVLE
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
EKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEYLQKQGCDAVVAQGLEAGGHR
HCCCCEEEEECCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
GSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTMLSAGAVAVQIGTAFLVC
CCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCEEEEECEEEEEE
HESGASQEYRDLLLKGKPKDTELIKVFSGRWSRGLSNRFSREMKIHETDTPDYPIQHWLT
ECCCCCHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCCCHHHHHC
TPLRKKAQESGRPEFQSLWSGQGLGSLRACSVAEYMATLSR
CHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA