Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522147

Identifier: 42522147

GI number: 42522147

Start: 508534

End: 509526

Strand: Direct

Name: 42522147

Synonym: Bd0547

Alternate gene names: NA

Gene position: 508534-509526 (Clockwise)

Preceding gene: 42522146

Following gene: 42522148

Centisome position: 13.44

GC content: 52.57

Gene sequence:

>993_bases
TTGATCAAGATCAGCTACAGCCCCTACACTCTGAAACCTGTCCAGTCCCTGAATGCCGCTACAGCGGCCACCGCGCGTGA
AGGGGTCTTGCTGAAGGTTGAGTGGAATGACGGGCTGTATGGCTTTGCGGATCTTCATCCGTGGCCTGAGCTGGGAGATC
TGTCCCTGGAAGAACAGCTTTCTGATCTGCGTATGGGGCGCATGACCACACAGATTGAGCAAAGCATCTGGCTGGCCCGT
CGGGACGCGCTTCTTCGCAAAGAAAAGAAACACGTCTTTGATGGCGGCGAAAAAATCAAAAACAACTATCTGCTTTCGCA
CTTTCAGGACCTGAAGCCCGGGTTTTTGGATGGACTGAAAAACGAAGGCTACAACACGGTCAAAGTCAAAATGGGCCGTG
ATCTGCAAAAAGAAGCCGACATGTTAACCCATATCGCCGCTTCGGGCATGCGCATGCGCCTGGATTTCAATGCGTTGGGA
AGCTGGCAGACTTTTGAAAAGTTCATGGTGAACCTGCCGCTGACGGTGCGTCCGCTGATTGAATACGTTGAAGATCCCTT
TCCGTTTGATTTTCACGCCTGGGGCGAAGCCCGCAAGCTGGCCAAAATCGCGTTGGACAATCAGTACGACAAAGTGCCGT
GGGGTAAGATTGCTTCAGCGCCTTTTGATGTGATCGTGATTAAGCCCGCAAAGACCGACGTCGACAAGGCGGTCGCCCAA
TGCCAGAAGTGGAACCTGAAACTGGCGGTGACCAGCTATATGGATCATCCGGTGGGTGTTGTGCATGCCGTGGGTGTGGC
GATGGAATTAAAAGACAAGTATGGGGACATGATTCTTGAATCCGGCTGTCTGACTCATCGCCTGTACCAGATGGATTCTT
TTGCCGCCGAGCTTTCCACGCAAGGACCGTATCTTTTGAAGAACAAAGGCACGGGAGTGGGCTTTGATAAACTGCTGGAG
GCCCTGACGTGGTATCAGCTCAAAGTCCGATAG

Upstream 100 bases:

>100_bases
TTTTCGCCACGGAGCCAAGTCCGGCATACAATAAATTCCTGGGGCAGGCAGCGGGATTGCATCTGCTCTTTGGACTTCTT
ATTGCGATTGGATTTGCTTT

Downstream 100 bases:

>100_bases
ATCTTCATTCTGAATCTAACGAAATCCTGCTGAACCCGCGCTGGCCTGAAATCGACTATCAGGCTTTGTACCGTCTTGCG
GAAGAAAGTCAGATTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIKISYSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQLSDLRMGRMTTQIEQSIWLAR
RDALLRKEKKHVFDGGEKIKNNYLLSHFQDLKPGFLDGLKNEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALG
SWQTFEKFMVNLPLTVRPLIEYVEDPFPFDFHAWGEARKLAKIALDNQYDKVPWGKIASAPFDVIVIKPAKTDVDKAVAQ
CQKWNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELSTQGPYLLKNKGTGVGFDKLLE
ALTWYQLKVR

Sequences:

>Translated_330_residues
MIKISYSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQLSDLRMGRMTTQIEQSIWLAR
RDALLRKEKKHVFDGGEKIKNNYLLSHFQDLKPGFLDGLKNEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALG
SWQTFEKFMVNLPLTVRPLIEYVEDPFPFDFHAWGEARKLAKIALDNQYDKVPWGKIASAPFDVIVIKPAKTDVDKAVAQ
CQKWNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELSTQGPYLLKNKGTGVGFDKLLE
ALTWYQLKVR
>Mature_330_residues
MIKISYSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQLSDLRMGRMTTQIEQSIWLAR
RDALLRKEKKHVFDGGEKIKNNYLLSHFQDLKPGFLDGLKNEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALG
SWQTFEKFMVNLPLTVRPLIEYVEDPFPFDFHAWGEARKLAKIALDNQYDKVPWGKIASAPFDVIVIKPAKTDVDKAVAQ
CQKWNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELSTQGPYLLKNKGTGVGFDKLLE
ALTWYQLKVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37402; Mature: 37402

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKISYSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQL
CEEEECCCCEECHHHHCCHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHH
SDLRMGRMTTQIEQSIWLARRDALLRKEKKHVFDGGEKIKNNYLLSHFQDLKPGFLDGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
NEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALGSWQTFEKFMVNLPLTVRPLI
CCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHH
EYVEDPFPFDFHAWGEARKLAKIALDNQYDKVPWGKIASAPFDVIVIKPAKTDVDKAVAQ
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
CQKWNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELST
HHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
QGPYLLKNKGTGVGFDKLLEALTWYQLKVR
CCCEEEECCCCCCCHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MIKISYSPYTLKPVQSLNAATAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEEQL
CEEEECCCCEECHHHHCCHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCCCHHHHH
SDLRMGRMTTQIEQSIWLARRDALLRKEKKHVFDGGEKIKNNYLLSHFQDLKPGFLDGLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHH
NEGYNTVKVKMGRDLQKEADMLTHIAASGMRMRLDFNALGSWQTFEKFMVNLPLTVRPLI
CCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHH
EYVEDPFPFDFHAWGEARKLAKIALDNQYDKVPWGKIASAPFDVIVIKPAKTDVDKAVAQ
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
CQKWNLKLAVTSYMDHPVGVVHAVGVAMELKDKYGDMILESGCLTHRLYQMDSFAAELST
HHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
QGPYLLKNKGTGVGFDKLLEALTWYQLKVR
CCCEEEECCCCCCCHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA