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The map label for this gene is cdh [H]

Identifier: 42522122

GI number: 42522122

Start: 482978

End: 483757

Strand: Direct

Name: cdh [H]

Synonym: Bd0518

Alternate gene names: 42522122

Gene position: 482978-483757 (Clockwise)

Preceding gene: 42522121

Following gene: 42522123

Centisome position: 12.77

GC content: 49.49

Gene sequence:

>780_bases
GTGAAAAACCTGTCTTTCGTTTTCGCCGCTGTTGCTGTTCTGGGACTTAGCTCCTGCAAGTCAAAACCTGTCATTGAAGT
TCCGCGTTCGGACGCCCTGTGGAATCTCATCAGCACGCAGTGCCTGCCGTTGCATAAAATCGGTGAAGAAAAAAATCCGT
GCATCGAAGTGAACATCGCTCAAGGCGAGGAAAAAGGTTATGTCGTCTTTAAAGACCGTGTGGGGGATTTGCAGTATCTG
CTGATGCCGACTGAAAAAATCACCGGCATGGAAAGCCCCGAAATCCGCGCAGCCGATGCGACTAACTATTTTGACCTGGC
CTGGAAGGCAAGAAGCTATATGGAAAAAAAGCACGGCTCAGCCATTCCTGTGGAGGCGGTGTCGTTGGCGATCAACTCGC
AGTTCGGGCGCAGTCAGAATCAGCTGCATATTCATGTGTCTTGTGTGAAACCTTTGGTGCAGCAGCACTTGCAGGAACAG
TCCGCGAAATTGAAAAACGGCTGGAGTCTGTTGCCACAGCCTTTGCTGGGTCATAAGTATTATGCCCGCAAGGTCAGTGA
AAAAGAGCTGGAAAAAGGCAACGCCTTCCAAATGCTGGCCGATGGTGTTCCAGGTGCCAAAGATCACAGCGGTGAGTTTG
GATTGGGTCTGGTGGCAGTGAAAGACAAAAAAAAGGGCCATAGTTTGATTTTGCTCACAAGTCGTTTTGAGCGTGGCACA
AACAATTACGGCTCAGTCGAAGAAATTCAAGATCACTCTTGCCCTCAATTGGCCCATTGA

Upstream 100 bases:

>100_bases
AGAACTCAGCCGTTATCGCCAGCTAGACGAAGTGAGGGATAATTACTCACTTCGTGATTTGATTCCTCCGTTTGGATAAA
TTTCTAAACGGAGGTCGTTT

Downstream 100 bases:

>100_bases
TTATGGAAATTTAAGTGTTGCAGCGCTTCGGAAAAAGGTACCTGGTACCTTTTGTCGCACTGGTTTATGTCTTTTACCCG
AAAAGAACAGCTGGCCCTTT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKNLSFVFAAVAVLGLSSCKSKPVIEVPRSDALWNLISTQCLPLHKIGEEKNPCIEVNIAQGEEKGYVVFKDRVGDLQYL
LMPTEKITGMESPEIRAADATNYFDLAWKARSYMEKKHGSAIPVEAVSLAINSQFGRSQNQLHIHVSCVKPLVQQHLQEQ
SAKLKNGWSLLPQPLLGHKYYARKVSEKELEKGNAFQMLADGVPGAKDHSGEFGLGLVAVKDKKKGHSLILLTSRFERGT
NNYGSVEEIQDHSCPQLAH

Sequences:

>Translated_259_residues
MKNLSFVFAAVAVLGLSSCKSKPVIEVPRSDALWNLISTQCLPLHKIGEEKNPCIEVNIAQGEEKGYVVFKDRVGDLQYL
LMPTEKITGMESPEIRAADATNYFDLAWKARSYMEKKHGSAIPVEAVSLAINSQFGRSQNQLHIHVSCVKPLVQQHLQEQ
SAKLKNGWSLLPQPLLGHKYYARKVSEKELEKGNAFQMLADGVPGAKDHSGEFGLGLVAVKDKKKGHSLILLTSRFERGT
NNYGSVEEIQDHSCPQLAH
>Mature_259_residues
MKNLSFVFAAVAVLGLSSCKSKPVIEVPRSDALWNLISTQCLPLHKIGEEKNPCIEVNIAQGEEKGYVVFKDRVGDLQYL
LMPTEKITGMESPEIRAADATNYFDLAWKARSYMEKKHGSAIPVEAVSLAINSQFGRSQNQLHIHVSCVKPLVQQHLQEQ
SAKLKNGWSLLPQPLLGHKYYARKVSEKELEKGNAFQMLADGVPGAKDHSGEFGLGLVAVKDKKKGHSLILLTSRFERGT
NNYGSVEEIQDHSCPQLAH

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=225, Percent_Identity=44.8888888888889, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 28691; Mature: 28691

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSFVFAAVAVLGLSSCKSKPVIEVPRSDALWNLISTQCLPLHKIGEEKNPCIEVNIA
CCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEEE
QGEEKGYVVFKDRVGDLQYLLMPTEKITGMESPEIRAADATNYFDLAWKARSYMEKKHGS
CCCCCCEEEEECCCCCEEEEEECHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
AIPVEAVSLAINSQFGRSQNQLHIHVSCVKPLVQQHLQEQSAKLKNGWSLLPQPLLGHKY
CCCHHHHHEEHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHH
YARKVSEKELEKGNAFQMLADGVPGAKDHSGEFGLGLVAVKDKKKGHSLILLTSRFERGT
HHHHCCHHHHHCCCCEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
NNYGSVEEIQDHSCPQLAH
CCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MKNLSFVFAAVAVLGLSSCKSKPVIEVPRSDALWNLISTQCLPLHKIGEEKNPCIEVNIA
CCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCHHHCCCCCCCEEEEEEE
QGEEKGYVVFKDRVGDLQYLLMPTEKITGMESPEIRAADATNYFDLAWKARSYMEKKHGS
CCCCCCEEEEECCCCCEEEEEECHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
AIPVEAVSLAINSQFGRSQNQLHIHVSCVKPLVQQHLQEQSAKLKNGWSLLPQPLLGHKY
CCCHHHHHEEHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHH
YARKVSEKELEKGNAFQMLADGVPGAKDHSGEFGLGLVAVKDKKKGHSLILLTSRFERGT
HHHHCCHHHHHCCCCEEHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCC
NNYGSVEEIQDHSCPQLAH
CCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]