Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522121

Identifier: 42522121

GI number: 42522121

Start: 482409

End: 482828

Strand: Direct

Name: 42522121

Synonym: Bd0517

Alternate gene names: NA

Gene position: 482409-482828 (Clockwise)

Preceding gene: 42522120

Following gene: 42522122

Centisome position: 12.75

GC content: 48.1

Gene sequence:

>420_bases
ATGTCTGTATCACGCCTTGAATCGTATCGAATCAAAGCCAAACTTTTGCAAAAAGCCAAACAGAAAGCCGGTCAGGATTT
TCAGTTAAAGGATGCTTTTGCCCTGCTTGCAAAGACTGCGGGTTTTTCCTCGTGGAATGATTTGAAAGCCACGCTGGAAA
GCCAGGTGGACTTTTGCAAGAAGGGTCACAGCGCTTACTGGAAGGTCTGGTATGCGTCTTATGACGAAGCCCGGGCTCAT
CTGGATTCTGACGGGGGCTATTTGCTGCCTTATCAGAAAGACTTTTTCATCTGCGATGAAAACTTCATTCAGTGGCTGGG
GCTGGAAGTTGAGGACGAGGACCTTTTGAAGGTCGGTCGCGACTGGGCGAAGCCTCTGGATGCCGTTGCTTATTCACGTC
TGCTGAAAAAAATGAAGTAA

Upstream 100 bases:

>100_bases
TCTCATTTCGTGATGCGATCTAAATCGTGTCTTCAAAAAATCAAAATTAATTCTTTTGGTTGCCATGGGCGGGGACGGCG
ACAAGACCAAAGGATGTTCT

Downstream 100 bases:

>100_bases
GTTGCTTCCGCTTTCGCGGCTTCCGCCGCTCCAGCTCTGCCAGCGAGGCAGAACTCAGCCGTTATCGCCAGCTAGACGAA
GTGAGGGATAATTACTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSVSRLESYRIKAKLLQKAKQKAGQDFQLKDAFALLAKTAGFSSWNDLKATLESQVDFCKKGHSAYWKVWYASYDEARAH
LDSDGGYLLPYQKDFFICDENFIQWLGLEVEDEDLLKVGRDWAKPLDAVAYSRLLKKMK

Sequences:

>Translated_139_residues
MSVSRLESYRIKAKLLQKAKQKAGQDFQLKDAFALLAKTAGFSSWNDLKATLESQVDFCKKGHSAYWKVWYASYDEARAH
LDSDGGYLLPYQKDFFICDENFIQWLGLEVEDEDLLKVGRDWAKPLDAVAYSRLLKKMK
>Mature_138_residues
SVSRLESYRIKAKLLQKAKQKAGQDFQLKDAFALLAKTAGFSSWNDLKATLESQVDFCKKGHSAYWKVWYASYDEARAHL
DSDGGYLLPYQKDFFICDENFIQWLGLEVEDEDLLKVGRDWAKPLDAVAYSRLLKKMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16053; Mature: 15922

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSRLESYRIKAKLLQKAKQKAGQDFQLKDAFALLAKTAGFSSWNDLKATLESQVDFCK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KGHSAYWKVWYASYDEARAHLDSDGGYLLPYQKDFFICDENFIQWLGLEVEDEDLLKVGR
CCCCCEEEEEECCHHHHHHHCCCCCCEECCCCCCEEEECHHHHHHHCCCCCHHHHHHHHH
DWAKPLDAVAYSRLLKKMK
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVSRLESYRIKAKLLQKAKQKAGQDFQLKDAFALLAKTAGFSSWNDLKATLESQVDFCK
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KGHSAYWKVWYASYDEARAHLDSDGGYLLPYQKDFFICDENFIQWLGLEVEDEDLLKVGR
CCCCCEEEEEECCHHHHHHHCCCCCCEECCCCCCEEEECHHHHHHHCCCCCHHHHHHHHH
DWAKPLDAVAYSRLLKKMK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA