Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is artJ [C]

Identifier: 42522111

GI number: 42522111

Start: 474641

End: 475462

Strand: Direct

Name: artJ [C]

Synonym: Bd0505

Alternate gene names: 42522111

Gene position: 474641-475462 (Clockwise)

Preceding gene: 42522110

Following gene: 42522112

Centisome position: 12.55

GC content: 46.84

Gene sequence:

>822_bases
TTGTTCATTCGCTGTTATGATTACAGTGTGAAAACACGGTTATTAATTCTTTCATTGATCCTTCTATGTTTTTCTACAGT
GGCGTCTGCGAAAGACTGTGGTCGCCGCTATCGCATTATTGTGAACAACTATGCCCCTTTGTTTGACGTGAACAATGAAG
GTCATGTTCACGGTCTGACGTTTGATATTATGAACGAACTTTCGCAGCGGTTGGGTTGTGTGGTTTCACAGGCCCCCATG
GATGCCCCGCGAATGCAGGATGATTTTAATAACTGGCGTGCGGATATTGTGGGTCTGGTCATCCCTTCAGAAAAGTACCT
TGCCACTGGAGAGTATGTTCCGGTGTACAAGACGGTCCGGAAGCTGTTGGTGAACAAGGCGCACTATGATCGCTCACGCA
CGATAGCAGACTATATTAAAGACAGCCGTATCAAGTTCGGCGATCAAATCGGCACTCGTTTCTTTTTGACGACCGACGAG
AAAAAATTGTTATTCGAAGCCGGGCGCATCGTTCAATATCCAAGTCCGGCGACGGGCTTTCGTCAGCTGACTTCGGGGCG
GGTGCAGGCGATGTTCACATCACAATCAATTTACAACTATTACCAAAAGACGATTCCCGATTTGAATCAGAGTGTGGTGG
CCATTCCCGATCCCAACTATGAGATGGAAGGCGGGATCTATCTTTCTGTGCGCAGAATTTCGAAGACCGAAGCAATGCAG
ATTAAAAAAGCCATCAGCGACATGAGAAAAGACGGAACGCTTCGCCGGATCGTTGCAAAATATGCCTCTGCGGAGGATTT
GACTTTCTATAAAGACCTTTAG

Upstream 100 bases:

>100_bases
GAAGACGCCAAGATCGTCATCCCTGACACATGGGCGCAAGAACTGCCTTGAGTTTAGTCTTGTTACAAGACTGAAAGAGT
GGGGTCTTCTTGTTCGTTCT

Downstream 100 bases:

>100_bases
GTTGCCCGCCAGGTGGTTCTCGTATTAACTGATGTTAACTGGAGAACCATGATGAACTCTTCCGTATATTCCTCTTTGGA
CTTAAATGGCAAAACCGCCG

Product: hypothetical protein

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM
DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE
KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ
IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL

Sequences:

>Translated_273_residues
MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM
DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE
KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ
IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL
>Mature_273_residues
MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLTFDIMNELSQRLGCVVSQAPM
DAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVRKLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDE
KKLLFEAGRIVQYPSPATGFRQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ
IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL

Specific function: Binds Arginine; Part Of The Arginine Periplasmic Transport System. [C]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31317; Mature: 31317

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLT
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCEEEEH
FDIMNELSQRLGCVVSQAPMDAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVR
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCHHHHHHH
KLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDEKKLLFEAGRIVQYPSPATGF
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCEEECCCCCHHH
RQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ
HHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEEHHHHHHHH
IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFIRCYDYSVKTRLLILSLILLCFSTVASAKDCGRRYRIIVNNYAPLFDVNNEGHVHGLT
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCCEEEEH
FDIMNELSQRLGCVVSQAPMDAPRMQDDFNNWRADIVGLVIPSEKYLATGEYVPVYKTVR
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEEECCCCEEECCCCCHHHHHHH
KLLVNKAHYDRSRTIADYIKDSRIKFGDQIGTRFFLTTDEKKLLFEAGRIVQYPSPATGF
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCEEECCCCCHHH
RQLTSGRVQAMFTSQSIYNYYQKTIPDLNQSVVAIPDPNYEMEGGIYLSVRRISKTEAMQ
HHHHCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCEEEEEEEHHHHHHHH
IKKAISDMRKDGTLRRIVAKYASAEDLTFYKDL
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA