| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522097
Identifier: 42522097
GI number: 42522097
Start: 458206
End: 459285
Strand: Direct
Name: 42522097
Synonym: Bd0490
Alternate gene names: NA
Gene position: 458206-459285 (Clockwise)
Preceding gene: 42522096
Following gene: 42522098
Centisome position: 12.11
GC content: 53.89
Gene sequence:
>1080_bases ATGGCCATTCGTATCCTTTTCAAAAGCCTGCTTTTGCTCGCAGCCGTTTCTTTGACCGGGGCCCAGGCCTATGCCGAAGA CGATGCCAATCTCCTGCTTTTTGAATCCGCCCCCAGCCAAGCCGAAGCCGCAAAAGCCCCGCGCACCGACATGCCTGACG AAGCGGTGATAAAACTGGATTTGTCTGAAGTGGTGGAAGGCGAGAAAGACTTTAATCGCAAGGCCTTTGTTGAAAGAGCC CGTGCTGCGATGACGGCTGATATTCCCAACGACAAGCTTTTTGAGTTTGAAGGTCCGCGCACGGAGGCCGAACTGGAAAA AGTGCTGGAGCTTTCTGATGCCGAGATCGCCAAGTTCCTGGCCAAAAAATCAGCCTTCCTTGGAAAGTTCGCCCGTGTGC TTTCTTTCTTCCGCGTGAAACCAGGCAAGATCAACAAGGCTTTGAACGAACTGAACAACCGCTTTTATGAAAGTTCCCAT GTCGTTTCCCGCAGCAATGTGAAGGGCGGGACGATGATGGTTTCCATTGGGGCGGGCCTGGCGCTGCCGCAGAAGGTGAT GGAAGCTCTTCGTGGCAGAAGCATTGGTCGTTTCATCCCTGAATCCGGTGGTTTCTTTTACATGCTGGGACTGGGGGCGG GGGTTTCACGCCAGGTGGGATCCGACGGCAAATCAAAAATGGTCTTTGAGATTTTCATGGATGTCGAACGCCTGAAGAAA ACCCTGACCGGTGTGGCAGAGGTTTCTGCGGCCGGCACGTATGGGCTTGTGTTTGAAAAACGTGATGGCACTTTCGCCAG TCAGAAAAACACCACCATGTACGGTGGCGCGACAGGTGTCTTCCGCCAGGGGCCGAATCAGTTTGGCTGGGCGGCTTCCA CGGGGATGTCGATGCCTCCGGGGATTGGTATTTTCCTCGTGTATCAGGATCATGCGACCCGATACTATCTTTTCCGTCTG GAGGGTTTAAGGGCGTCGATTCCGGCTCTGCGAGGATTCAAAGACAATATCATCTCGGCCTTGAGAAACTATGCGCACTT CGGCGGCAAGGTCGTCACCTGCCAGGGAGCTTTGTTCTAG
Upstream 100 bases:
>100_bases CCTTATAAGCAATTTAGCAGAGATAATAGCTTTTTTAGGGCCTTTCTCTTGTTTGCCGGCTGGTATGCTCGTTGCTCCTT TTTGGGAAACAGGAGTTCCC
Downstream 100 bases:
>100_bases GCTGTTAAAAGTTCCCTCCATCTTGCGGCCCTTCGGGGAAACTGGTAGGTTGCCGCGCATGACTACTAAAGTGCGCTTTA CCGTTGCTTATGACGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAIRILFKSLLLLAAVSLTGAQAYAEDDANLLLFESAPSQAEAAKAPRTDMPDEAVIKLDLSEVVEGEKDFNRKAFVERA RAAMTADIPNDKLFEFEGPRTEAELEKVLELSDAEIAKFLAKKSAFLGKFARVLSFFRVKPGKINKALNELNNRFYESSH VVSRSNVKGGTMMVSIGAGLALPQKVMEALRGRSIGRFIPESGGFFYMLGLGAGVSRQVGSDGKSKMVFEIFMDVERLKK TLTGVAEVSAAGTYGLVFEKRDGTFASQKNTTMYGGATGVFRQGPNQFGWAASTGMSMPPGIGIFLVYQDHATRYYLFRL EGLRASIPALRGFKDNIISALRNYAHFGGKVVTCQGALF
Sequences:
>Translated_359_residues MAIRILFKSLLLLAAVSLTGAQAYAEDDANLLLFESAPSQAEAAKAPRTDMPDEAVIKLDLSEVVEGEKDFNRKAFVERA RAAMTADIPNDKLFEFEGPRTEAELEKVLELSDAEIAKFLAKKSAFLGKFARVLSFFRVKPGKINKALNELNNRFYESSH VVSRSNVKGGTMMVSIGAGLALPQKVMEALRGRSIGRFIPESGGFFYMLGLGAGVSRQVGSDGKSKMVFEIFMDVERLKK TLTGVAEVSAAGTYGLVFEKRDGTFASQKNTTMYGGATGVFRQGPNQFGWAASTGMSMPPGIGIFLVYQDHATRYYLFRL EGLRASIPALRGFKDNIISALRNYAHFGGKVVTCQGALF >Mature_358_residues AIRILFKSLLLLAAVSLTGAQAYAEDDANLLLFESAPSQAEAAKAPRTDMPDEAVIKLDLSEVVEGEKDFNRKAFVERAR AAMTADIPNDKLFEFEGPRTEAELEKVLELSDAEIAKFLAKKSAFLGKFARVLSFFRVKPGKINKALNELNNRFYESSHV VSRSNVKGGTMMVSIGAGLALPQKVMEALRGRSIGRFIPESGGFFYMLGLGAGVSRQVGSDGKSKMVFEIFMDVERLKKT LTGVAEVSAAGTYGLVFEKRDGTFASQKNTTMYGGATGVFRQGPNQFGWAASTGMSMPPGIGIFLVYQDHATRYYLFRLE GLRASIPALRGFKDNIISALRNYAHFGGKVVTCQGALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39125; Mature: 38993
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRILFKSLLLLAAVSLTGAQAYAEDDANLLLFESAPSQAEAAKAPRTDMPDEAVIKLD CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHEEEEE LSEVVEGEKDFNRKAFVERARAAMTADIPNDKLFEFEGPRTEAELEKVLELSDAEIAKFL HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHH AKKSAFLGKFARVLSFFRVKPGKINKALNELNNRFYESSHVVSRSNVKGGTMMVSIGAGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCC ALPQKVMEALRGRSIGRFIPESGGFFYMLGLGAGVSRQVGSDGKSKMVFEIFMDVERLKK CCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHH TLTGVAEVSAAGTYGLVFEKRDGTFASQKNTTMYGGATGVFRQGPNQFGWAASTGMSMPP HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHCCCCCCCCHHCCCCCCCC GIGIFLVYQDHATRYYLFRLEGLRASIPALRGFKDNIISALRNYAHFGGKVVTCQGALF CCEEEEEEECCCCEEEEEEECCCHHHCHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCC >Mature Secondary Structure AIRILFKSLLLLAAVSLTGAQAYAEDDANLLLFESAPSQAEAAKAPRTDMPDEAVIKLD HHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCHHEEEEE LSEVVEGEKDFNRKAFVERARAAMTADIPNDKLFEFEGPRTEAELEKVLELSDAEIAKFL HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHH AKKSAFLGKFARVLSFFRVKPGKINKALNELNNRFYESSHVVSRSNVKGGTMMVSIGAGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCC ALPQKVMEALRGRSIGRFIPESGGFFYMLGLGAGVSRQVGSDGKSKMVFEIFMDVERLKK CCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHH TLTGVAEVSAAGTYGLVFEKRDGTFASQKNTTMYGGATGVFRQGPNQFGWAASTGMSMPP HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCHHHCCCCCCCCHHCCCCCCCC GIGIFLVYQDHATRYYLFRLEGLRASIPALRGFKDNIISALRNYAHFGGKVVTCQGALF CCEEEEEEECCCCEEEEEEECCCHHHCHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA