| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522094
Identifier: 42522094
GI number: 42522094
Start: 455552
End: 456622
Strand: Direct
Name: 42522094
Synonym: Bd0486
Alternate gene names: NA
Gene position: 455552-456622 (Clockwise)
Preceding gene: 42522093
Following gene: 42522096
Centisome position: 12.04
GC content: 55.09
Gene sequence:
>1071_bases GTGAATGCCTGGCACAAATATTTTGTAGTTCTGCTGGCTGTTGTGTCTTTCCAGGCCGCCAAGGCGCAGGAACAAGGCCC GCCACAAGAACCGCCGTTCATTCAGGAAGAAACCGAATTTGAAGGCGAAGACCTGCAGATTGAGGATGAAATCCAAAGTG CCGCTCCGACCAAAGAGTCCGGCACAGTGAACTTGAACGAACAAACTCCAAGTGAATCCAATATCGAAGAAGACCTTATG CTGGAGGAAGAAGCCCCGGCCGTGGTTGAGGAAGCCGCTCCGGTGGTGATTCCCGAAGAGCCCCCACAGCAGGTGGCGCC GGTGCGCAAGACCCCGCAGGTCGAAGTGGTTCGTCGTTCCAAAAGCGGTGGGGTGGAATACATCCAGCATCCGCAGGCGG CCAAGGGGCTGATGACCATTACCAAAGATGGCGCCTACATTTATCGTGTAAAGTCGCCGTCCGCCTCGAAAGAGTCCGGC AGCTTCCGGGTCGGGATGATGGATCCTCCAAAGATTGATTCTGCCGACGGCGTGACCAACTACGATTCCATGTATGGGGG TTCCTCCCAGGCGATGTTCATGTTTGATTATGAGTGGAAGCCCTTCAATGGCTATGGCAGTCTGGGCATTCAAGCAGGTC TTGGCTTGCTGTATGCTACCGGGCAGGGGCGATTCATCACTCCGGATCCGCAATTCCCGGATCAGGAAGCCAAGGAAGAA TATTCCTTCCTGGCGATTCCGATCAACGTCGGGGGCGTGTATCGTCTGGAGTGGAGTGACCGGCAATGGATTGCGCCGTA TGTTTCCGCCGGTGGCACCTATATCGGTGTTGCAGAAATTCGTGACGATGGGAAGTCCCCGTCACTGGTGGGAACACCGG GCGTGTATGGGGCCGGTGGATTGCTGTTCAATATCGCTGCGATGAGCGACGATACAGCTTTCACGCTGAGTTCAGAATAC GGCATCAATAACCTGTGGCTGTCTTTGGAATACCGTCAACTGCAGACGTTCAGCGAAGACGTCGACTTCTCGGGTGGTAT TGTTGGTGCCGGAGTGACGGTCGACTACTAG
Upstream 100 bases:
>100_bases TTGGTCTGTGGGTGACACTGCTGTTGGCCGTTCTGACAGGCGTGTCCACTTATGAGATGTACCGTCGCTTTGTCGTCGGT CGCAAAACACGGGGTGAAGC
Downstream 100 bases:
>100_bases GCTGGTGAAAAGGGCCCACCTCCGCGTGGGCTTCGCCTCAAAATGCCAGAGGCATTTTGTGCATCTGGAACCTTTTGATC AGCCTTGGCTCTCGGTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MNAWHKYFVVLLAVVSFQAAKAQEQGPPQEPPFIQEETEFEGEDLQIEDEIQSAAPTKESGTVNLNEQTPSESNIEEDLM LEEEAPAVVEEAAPVVIPEEPPQQVAPVRKTPQVEVVRRSKSGGVEYIQHPQAAKGLMTITKDGAYIYRVKSPSASKESG SFRVGMMDPPKIDSADGVTNYDSMYGGSSQAMFMFDYEWKPFNGYGSLGIQAGLGLLYATGQGRFITPDPQFPDQEAKEE YSFLAIPINVGGVYRLEWSDRQWIAPYVSAGGTYIGVAEIRDDGKSPSLVGTPGVYGAGGLLFNIAAMSDDTAFTLSSEY GINNLWLSLEYRQLQTFSEDVDFSGGIVGAGVTVDY
Sequences:
>Translated_356_residues MNAWHKYFVVLLAVVSFQAAKAQEQGPPQEPPFIQEETEFEGEDLQIEDEIQSAAPTKESGTVNLNEQTPSESNIEEDLM LEEEAPAVVEEAAPVVIPEEPPQQVAPVRKTPQVEVVRRSKSGGVEYIQHPQAAKGLMTITKDGAYIYRVKSPSASKESG SFRVGMMDPPKIDSADGVTNYDSMYGGSSQAMFMFDYEWKPFNGYGSLGIQAGLGLLYATGQGRFITPDPQFPDQEAKEE YSFLAIPINVGGVYRLEWSDRQWIAPYVSAGGTYIGVAEIRDDGKSPSLVGTPGVYGAGGLLFNIAAMSDDTAFTLSSEY GINNLWLSLEYRQLQTFSEDVDFSGGIVGAGVTVDY >Mature_356_residues MNAWHKYFVVLLAVVSFQAAKAQEQGPPQEPPFIQEETEFEGEDLQIEDEIQSAAPTKESGTVNLNEQTPSESNIEEDLM LEEEAPAVVEEAAPVVIPEEPPQQVAPVRKTPQVEVVRRSKSGGVEYIQHPQAAKGLMTITKDGAYIYRVKSPSASKESG SFRVGMMDPPKIDSADGVTNYDSMYGGSSQAMFMFDYEWKPFNGYGSLGIQAGLGLLYATGQGRFITPDPQFPDQEAKEE YSFLAIPINVGGVYRLEWSDRQWIAPYVSAGGTYIGVAEIRDDGKSPSLVGTPGVYGAGGLLFNIAAMSDDTAFTLSSEY GINNLWLSLEYRQLQTFSEDVDFSGGIVGAGVTVDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38809; Mature: 38809
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWHKYFVVLLAVVSFQAAKAQEQGPPQEPPFIQEETEFEGEDLQIEDEIQSAAPTKES CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCC GTVNLNEQTPSESNIEEDLMLEEEAPAVVEEAAPVVIPEEPPQQVAPVRKTPQVEVVRRS CEEEECCCCCCCCCCHHHHEECCCCCHHHHHCCCEEECCCCCHHHCCCCCCCCEEEEEEC KSGGVEYIQHPQAAKGLMTITKDGAYIYRVKSPSASKESGSFRVGMMDPPKIDSADGVTN CCCCHHHHCCCCHHCCEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC YDSMYGGSSQAMFMFDYEWKPFNGYGSLGIQAGLGLLYATGQGRFITPDPQFPDQEAKEE CHHHCCCCCCEEEEEEEEECCCCCCCCCCHHCCCEEEEECCCCEEECCCCCCCCHHHHCC YSFLAIPINVGGVYRLEWSDRQWIAPYVSAGGTYIGVAEIRDDGKSPSLVGTPGVYGAGG CEEEEEEEECCEEEEEEECCCCEECHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCCC LLFNIAAMSDDTAFTLSSEYGINNLWLSLEYRQLQTFSEDVDFSGGIVGAGVTVDY EEEEEEECCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHCCCCCCCEEECCEEECC >Mature Secondary Structure MNAWHKYFVVLLAVVSFQAAKAQEQGPPQEPPFIQEETEFEGEDLQIEDEIQSAAPTKES CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCCCC GTVNLNEQTPSESNIEEDLMLEEEAPAVVEEAAPVVIPEEPPQQVAPVRKTPQVEVVRRS CEEEECCCCCCCCCCHHHHEECCCCCHHHHHCCCEEECCCCCHHHCCCCCCCCEEEEEEC KSGGVEYIQHPQAAKGLMTITKDGAYIYRVKSPSASKESGSFRVGMMDPPKIDSADGVTN CCCCHHHHCCCCHHCCEEEEECCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC YDSMYGGSSQAMFMFDYEWKPFNGYGSLGIQAGLGLLYATGQGRFITPDPQFPDQEAKEE CHHHCCCCCCEEEEEEEEECCCCCCCCCCHHCCCEEEEECCCCEEECCCCCCCCHHHHCC YSFLAIPINVGGVYRLEWSDRQWIAPYVSAGGTYIGVAEIRDDGKSPSLVGTPGVYGAGG CEEEEEEEECCEEEEEEECCCCEECHHHHCCCCEEEEEEECCCCCCCCEEECCCCCCCCC LLFNIAAMSDDTAFTLSSEYGINNLWLSLEYRQLQTFSEDVDFSGGIVGAGVTVDY EEEEEEECCCCCEEEEECCCCCCEEEEEEEHHHHHHHHHCCCCCCCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA