Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522081

Identifier: 42522081

GI number: 42522081

Start: 442835

End: 443995

Strand: Direct

Name: 42522081

Synonym: Bd0473

Alternate gene names: NA

Gene position: 442835-443995 (Clockwise)

Preceding gene: 42522080

Following gene: 42522082

Centisome position: 11.71

GC content: 52.97

Gene sequence:

>1161_bases
ATGAGCGCAGCCCCTCAGGTGAAGGATTCCATGAAGTTTGATATCGAGATCATCAAAGGACCGCATATTGGTCAGAAGCT
TTCTTTTGAAAAGGCTTCTGTATCCATGGGCCGTGGTCCCGAGAATGACATTGTCCTTTCCCAGGATCCGCGCGTCAGCC
GTCAGCACGCGGAAATCAAACAGCGTGGCAATGAATTTGTGCTCGTCAATCTGAGTCAGAAAAACTTTGTGATGGTCAAT
GGCCAGAGCATTCAATCCGAAGTTCTTACGAACGATTCGGTGATTCAGATTGGTGAGACAGAAATTCTGTTCAAAGTCGA
CATGCCCGTGGTGCAGGCGCCTCCGCCAACACCGGCAGCGACACCGTCTCCGCTATTGACGCCAAATCCGTTCCCGGCGC
CGACTCCACCGCGTCCGCAGCAGATGCCGGTCAGCAATCCGTTCCCGCAGGCTCAGACGCCGGCTTATCAGCAGCCTCGT
CCGATGCCGGCGATGCCGAATCCTTCGATGCCTCCGGCACAGCCGATGGCTTATGGTGGGTACACTCCACCTCCGAATCA
CGGCATGCCCAACATGGGGGCGCCGATGGGTGGACCTTCTGGTGGTGGCGGACTGCTTTCCAATCCGAAGGCCAGATTCT
ATGGAATCATCGCCATTGTGGGTTTGGCAGCGTGGTTCTTCCTGTCGGATTCCGGCAATAAGAACAAAAAAGACCCGAAT
GCATTCAGAACTTCAGCTCTGTCCATGGCGGACGTGGCCGAGGCCGAGAAACGTTCGCAGGAGCTTTTGACAATTAAAAA
AGAAAAATACGACTCGGTTCAATACCGCCGGGCTCAGGAAAACTTCATCAAGGGCTTCCGCGACTTCCAGCAGGGCCAGT
ATGCTCGTGCGCGCGAGGCGTTCCAGGTTGTTTTGAATCTGGATCCGGACAACGAGCTGGCAAAACGGTATTTCCATCTT
TCGAAGATCAAGTTTGACGAGCTGGTGAAATTCAACATGATTCAAGGCAACCGATACCGCGAAAAAAAGAACTGGAGAAT
GTGCCAGTCGAATTATTCCAACGTGATGACCATGCTTCAGCACCGCAAGGACGATCCTTCATTCAAGGAAGCCAAGCAGT
TCTATGAAGAGTGCACGCTGAATCTGGAGGGCAGGTTCTAA

Upstream 100 bases:

>100_bases
TCAGCGGGCACCTTTGTATTCTGAGCTGTCAGGCATTCTGCACAGGCCAGGAAGTGGATTATTATGTGATCACTGTGTCA
CCAACTGAAGGAGGCTCGTG

Downstream 100 bases:

>100_bases
TGGCTCTTCTGCGTGTGCGCCTGCGTGGCAAAACAGTCTGTGAAGTGAATCTGACGGAGGACCGCTCTTATGTGGCCGGC
CGTAAAGAGGACTGTGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MSAAPQVKDSMKFDIEIIKGPHIGQKLSFEKASVSMGRGPENDIVLSQDPRVSRQHAEIKQRGNEFVLVNLSQKNFVMVN
GQSIQSEVLTNDSVIQIGETEILFKVDMPVVQAPPPTPAATPSPLLTPNPFPAPTPPRPQQMPVSNPFPQAQTPAYQQPR
PMPAMPNPSMPPAQPMAYGGYTPPPNHGMPNMGAPMGGPSGGGGLLSNPKARFYGIIAIVGLAAWFFLSDSGNKNKKDPN
AFRTSALSMADVAEAEKRSQELLTIKKEKYDSVQYRRAQENFIKGFRDFQQGQYARAREAFQVVLNLDPDNELAKRYFHL
SKIKFDELVKFNMIQGNRYREKKNWRMCQSNYSNVMTMLQHRKDDPSFKEAKQFYEECTLNLEGRF

Sequences:

>Translated_386_residues
MSAAPQVKDSMKFDIEIIKGPHIGQKLSFEKASVSMGRGPENDIVLSQDPRVSRQHAEIKQRGNEFVLVNLSQKNFVMVN
GQSIQSEVLTNDSVIQIGETEILFKVDMPVVQAPPPTPAATPSPLLTPNPFPAPTPPRPQQMPVSNPFPQAQTPAYQQPR
PMPAMPNPSMPPAQPMAYGGYTPPPNHGMPNMGAPMGGPSGGGGLLSNPKARFYGIIAIVGLAAWFFLSDSGNKNKKDPN
AFRTSALSMADVAEAEKRSQELLTIKKEKYDSVQYRRAQENFIKGFRDFQQGQYARAREAFQVVLNLDPDNELAKRYFHL
SKIKFDELVKFNMIQGNRYREKKNWRMCQSNYSNVMTMLQHRKDDPSFKEAKQFYEECTLNLEGRF
>Mature_385_residues
SAAPQVKDSMKFDIEIIKGPHIGQKLSFEKASVSMGRGPENDIVLSQDPRVSRQHAEIKQRGNEFVLVNLSQKNFVMVNG
QSIQSEVLTNDSVIQIGETEILFKVDMPVVQAPPPTPAATPSPLLTPNPFPAPTPPRPQQMPVSNPFPQAQTPAYQQPRP
MPAMPNPSMPPAQPMAYGGYTPPPNHGMPNMGAPMGGPSGGGGLLSNPKARFYGIIAIVGLAAWFFLSDSGNKNKKDPNA
FRTSALSMADVAEAEKRSQELLTIKKEKYDSVQYRRAQENFIKGFRDFQQGQYARAREAFQVVLNLDPDNELAKRYFHLS
KIKFDELVKFNMIQGNRYREKKNWRMCQSNYSNVMTMLQHRKDDPSFKEAKQFYEECTLNLEGRF

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43266; Mature: 43135

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50006 FHA_DOMAIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPQVKDSMKFDIEIIKGPHIGQKLSFEKASVSMGRGPENDIVLSQDPRVSRQHAEIK
CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCHHHHHHHH
QRGNEFVLVNLSQKNFVMVNGQSIQSEVLTNDSVIQIGETEILFKVDMPVVQAPPPTPAA
HCCCEEEEEEECCCCEEEEECCCHHHHHHCCCCEEEECCEEEEEEECCCEEECCCCCCCC
TPSPLLTPNPFPAPTPPRPQQMPVSNPFPQAQTPAYQQPRPMPAMPNPSMPPAQPMAYGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YTPPPNHGMPNMGAPMGGPSGGGGLLSNPKARFYGIIAIVGLAAWFFLSDSGNKNKKDPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AFRTSALSMADVAEAEKRSQELLTIKKEKYDSVQYRRAQENFIKGFRDFQQGQYARAREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FQVVLNLDPDNELAKRYFHLSKIKFDELVKFNMIQGNRYREKKNWRMCQSNYSNVMTMLQ
EEEEEECCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
HRKDDPSFKEAKQFYEECTLNLEGRF
HCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAAPQVKDSMKFDIEIIKGPHIGQKLSFEKASVSMGRGPENDIVLSQDPRVSRQHAEIK
CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCHHHHHHHH
QRGNEFVLVNLSQKNFVMVNGQSIQSEVLTNDSVIQIGETEILFKVDMPVVQAPPPTPAA
HCCCEEEEEEECCCCEEEEECCCHHHHHHCCCCEEEECCEEEEEEECCCEEECCCCCCCC
TPSPLLTPNPFPAPTPPRPQQMPVSNPFPQAQTPAYQQPRPMPAMPNPSMPPAQPMAYGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YTPPPNHGMPNMGAPMGGPSGGGGLLSNPKARFYGIIAIVGLAAWFFLSDSGNKNKKDPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
AFRTSALSMADVAEAEKRSQELLTIKKEKYDSVQYRRAQENFIKGFRDFQQGQYARAREA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
FQVVLNLDPDNELAKRYFHLSKIKFDELVKFNMIQGNRYREKKNWRMCQSNYSNVMTMLQ
EEEEEECCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
HRKDDPSFKEAKQFYEECTLNLEGRF
HCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA