Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522080

Identifier: 42522080

GI number: 42522080

Start: 441162

End: 442835

Strand: Direct

Name: 42522080

Synonym: Bd0472

Alternate gene names: NA

Gene position: 441162-442835 (Clockwise)

Preceding gene: 42522079

Following gene: 42522081

Centisome position: 11.66

GC content: 54.06

Gene sequence:

>1674_bases
ATGTGGGCGCTTAGAATCTTGTCCGGCCCGCAGGCGGGTTCAGTGCTGGAGCTGAAGATGGGGAAAAACCTCATCGGTCG
GGCTCCTCAGTGTGACATAAAACTTATCAGTTCCGGTGTTTCCAAGGAACACACCGAGATTGCTGTATTCAAAGATAAAA
TTGTTGTGACGGATCTTCGTTCCAGCAACGGCACTTATTTGAACGGTGTCCGTGTGCAGAGTGGTGTGATGCGTTTGGGT
GACAAACTGGGCATTCACGATGTGATTGCCGATGTGATCCCGGCGCAGGAATCCCGAGCACAGCGTCCGCAAGGGCAGCC
AAGTCCGCAGGCGCCAATGCCTTACTATGGCGGCGGAGCCGCTCCACAAATGCCGCAACCTATGCACATGGGTATGCCAC
AGCAAAATATGGGTATGCCTCAGGGGATGCCGCAGCCAATGGCGGGCATGGGGATGCCGGGCGCAGGCCCAGCACCCGCA
CCAGCTCCGGCATTCCAGCAGGGCGGTTTCAAAGGCCTGGTGGATAAATTCAACGAATATATGGACCGCGTGGCTTTGCC
CGGGGTTTACAAGCTTCCACAGTTTGTGGAAATGAAAATGGTTCTGCTGGGCTTTGTGGTGTTGTTTATCTTCTCCACAA
CGCTGCTTTCAATGATTCCGATGGTGCAGATCACCCGCGCCAGTATCATCAATGAAAGTAAACGCCGGGCGGCTTCCATT
GCCCGTACGGTGGCGACACTGAATCAGGCAGCTCTTTTGCAAAACAGTTATTCATCCTTAAGCACCAACGCGGCGGAATC
CGAAGACGGTGTGAAGCAGGTTCTGATTGTGCAGCAGTCTGATGGTATGATCCTGGCGCCGGCTTCGCGCGCGGGGACCA
CGCCGGATCTGCCGTTTGTTCACTCGGCCCGTCGGGAAATGCGCCCGCAGTCGGTGGAAGTGGACTCCTCCACTATCGGT
GCGAGCTTCCCAATTGGTCTGTTTGACCCGAACACGGGCGAGCAGTCGGTGAAGGCGCATGCGATTGTGCTTTATGATAT
CGGCAGTCTGGCCTTTGATGACGGCCGGGCGATCAGTCTGTTTATGCAGACGCTGGTGATTGCCTCATTGATTGGTTTGT
TGCTGTTCTACTTCATGTATAAGCTGATTGAATATCCGCTGGTGACGTTGAATGCACAACTGGACGCCGCCATGCGCGAA
AAAACTGACAATACGGTGGTGGATTTCCAGTTCCCGCCATTGCAGGCTTTGATTGGTAATGTCAACAGTCTGTTGACCAG
ATATATCAACGGTGACACCGACAAGGGCGGTGGTGCCGCAGGATTTGTGAACAAGGACGGCGAGGCTGAAAATCTGATGC
AGATGATCGGTTATCCATGTGTGGCGATTTCGAAGGAAGGCCGGATTATTTCCTGCAACCCTTCATTCCTGCAGGTGGCT
CGTGCTGAAATGGCGCAGATTCAGGGGCAGATGTACAAAGCAATCCCGGATGTGGCTTTGCAGCAGAATATCGAAGGTCT
GGTGGCGCGTTCCCGGGAAAATCCACGCGGCATCCACACGGATCAGCTGGAGTTCAGCGGGCACCTTTGTATTCTGAGCT
GTCAGGCATTCTGCACAGGCCAGGAAGTGGATTATTATGTGATCACTGTGTCACCAACTGAAGGAGGCTCGTGA

Upstream 100 bases:

>100_bases
CCCTGGAGACTGGTGCTCCCGGTGTGGGGAGCCGCTTCGGTGATAGAGATGGCATCAGGTACAGTCAGCAACGGGAATGT
CAGCGTGGGAGATCAACTTT

Downstream 100 bases:

>100_bases
TGAGCGCAGCCCCTCAGGTGAAGGATTCCATGAAGTTTGATATCGAGATCATCAAAGGACCGCATATTGGTCAGAAGCTT
TCTTTTGAAAAGGCTTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MWALRILSGPQAGSVLELKMGKNLIGRAPQCDIKLISSGVSKEHTEIAVFKDKIVVTDLRSSNGTYLNGVRVQSGVMRLG
DKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMPYYGGGAAPQMPQPMHMGMPQQNMGMPQGMPQPMAGMGMPGAGPAPA
PAPAFQQGGFKGLVDKFNEYMDRVALPGVYKLPQFVEMKMVLLGFVVLFIFSTTLLSMIPMVQITRASIINESKRRAASI
ARTVATLNQAALLQNSYSSLSTNAAESEDGVKQVLIVQQSDGMILAPASRAGTTPDLPFVHSARREMRPQSVEVDSSTIG
ASFPIGLFDPNTGEQSVKAHAIVLYDIGSLAFDDGRAISLFMQTLVIASLIGLLLFYFMYKLIEYPLVTLNAQLDAAMRE
KTDNTVVDFQFPPLQALIGNVNSLLTRYINGDTDKGGGAAGFVNKDGEAENLMQMIGYPCVAISKEGRIISCNPSFLQVA
RAEMAQIQGQMYKAIPDVALQQNIEGLVARSRENPRGIHTDQLEFSGHLCILSCQAFCTGQEVDYYVITVSPTEGGS

Sequences:

>Translated_557_residues
MWALRILSGPQAGSVLELKMGKNLIGRAPQCDIKLISSGVSKEHTEIAVFKDKIVVTDLRSSNGTYLNGVRVQSGVMRLG
DKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMPYYGGGAAPQMPQPMHMGMPQQNMGMPQGMPQPMAGMGMPGAGPAPA
PAPAFQQGGFKGLVDKFNEYMDRVALPGVYKLPQFVEMKMVLLGFVVLFIFSTTLLSMIPMVQITRASIINESKRRAASI
ARTVATLNQAALLQNSYSSLSTNAAESEDGVKQVLIVQQSDGMILAPASRAGTTPDLPFVHSARREMRPQSVEVDSSTIG
ASFPIGLFDPNTGEQSVKAHAIVLYDIGSLAFDDGRAISLFMQTLVIASLIGLLLFYFMYKLIEYPLVTLNAQLDAAMRE
KTDNTVVDFQFPPLQALIGNVNSLLTRYINGDTDKGGGAAGFVNKDGEAENLMQMIGYPCVAISKEGRIISCNPSFLQVA
RAEMAQIQGQMYKAIPDVALQQNIEGLVARSRENPRGIHTDQLEFSGHLCILSCQAFCTGQEVDYYVITVSPTEGGS
>Mature_557_residues
MWALRILSGPQAGSVLELKMGKNLIGRAPQCDIKLISSGVSKEHTEIAVFKDKIVVTDLRSSNGTYLNGVRVQSGVMRLG
DKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMPYYGGGAAPQMPQPMHMGMPQQNMGMPQGMPQPMAGMGMPGAGPAPA
PAPAFQQGGFKGLVDKFNEYMDRVALPGVYKLPQFVEMKMVLLGFVVLFIFSTTLLSMIPMVQITRASIINESKRRAASI
ARTVATLNQAALLQNSYSSLSTNAAESEDGVKQVLIVQQSDGMILAPASRAGTTPDLPFVHSARREMRPQSVEVDSSTIG
ASFPIGLFDPNTGEQSVKAHAIVLYDIGSLAFDDGRAISLFMQTLVIASLIGLLLFYFMYKLIEYPLVTLNAQLDAAMRE
KTDNTVVDFQFPPLQALIGNVNSLLTRYINGDTDKGGGAAGFVNKDGEAENLMQMIGYPCVAISKEGRIISCNPSFLQVA
RAEMAQIQGQMYKAIPDVALQQNIEGLVARSRENPRGIHTDQLEFSGHLCILSCQAFCTGQEVDYYVITVSPTEGGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60067; Mature: 60067

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWALRILSGPQAGSVLELKMGKNLIGRAPQCDIKLISSGVSKEHTEIAVFKDKIVVTDLR
CEEEEEECCCCCCCEEEEECCCHHHCCCCCCCHHHHHCCCCCCCCEEEEEECEEEEEEEC
SSNGTYLNGVRVQSGVMRLGDKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMPYYGGGA
CCCCCEEECEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC
APQMPQPMHMGMPQQNMGMPQGMPQPMAGMGMPGAGPAPAPAPAFQQGGFKGLVDKFNEY
CCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
MDRVALPGVYKLPQFVEMKMVLLGFVVLFIFSTTLLSMIPMVQITRASIINESKRRAASI
HHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTVATLNQAALLQNSYSSLSTNAAESEDGVKQVLIVQQSDGMILAPASRAGTTPDLPFV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCHH
HSARREMRPQSVEVDSSTIGASFPIGLFDPNTGEQSVKAHAIVLYDIGSLAFDDGRAISL
HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCHHHHH
FMQTLVIASLIGLLLFYFMYKLIEYPLVTLNAQLDAAMREKTDNTVVDFQFPPLQALIGN
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCEEEEECCCHHHHHCC
VNSLLTRYINGDTDKGGGAAGFVNKDGEAENLMQMIGYPCVAISKEGRIISCNPSFLQVA
HHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEECCCCCEEECCHHHHHHH
RAEMAQIQGQMYKAIPDVALQQNIEGLVARSRENPRGIHTDQLEFSGHLCILSCQAFCTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEEHHCCC
QEVDYYVITVSPTEGGS
CCCEEEEEEEECCCCCC
>Mature Secondary Structure
MWALRILSGPQAGSVLELKMGKNLIGRAPQCDIKLISSGVSKEHTEIAVFKDKIVVTDLR
CEEEEEECCCCCCCEEEEECCCHHHCCCCCCCHHHHHCCCCCCCCEEEEEECEEEEEEEC
SSNGTYLNGVRVQSGVMRLGDKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMPYYGGGA
CCCCCEEECEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC
APQMPQPMHMGMPQQNMGMPQGMPQPMAGMGMPGAGPAPAPAPAFQQGGFKGLVDKFNEY
CCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
MDRVALPGVYKLPQFVEMKMVLLGFVVLFIFSTTLLSMIPMVQITRASIINESKRRAASI
HHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARTVATLNQAALLQNSYSSLSTNAAESEDGVKQVLIVQQSDGMILAPASRAGTTPDLPFV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCCCHH
HSARREMRPQSVEVDSSTIGASFPIGLFDPNTGEQSVKAHAIVLYDIGSLAFDDGRAISL
HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEECCCHHHHH
FMQTLVIASLIGLLLFYFMYKLIEYPLVTLNAQLDAAMREKTDNTVVDFQFPPLQALIGN
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCEEEEECCCHHHHHCC
VNSLLTRYINGDTDKGGGAAGFVNKDGEAENLMQMIGYPCVAISKEGRIISCNPSFLQVA
HHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEECCCCCEEECCHHHHHHH
RAEMAQIQGQMYKAIPDVALQQNIEGLVARSRENPRGIHTDQLEFSGHLCILSCQAFCTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEEEHHCCC
QEVDYYVITVSPTEGGS
CCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA