Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522062

Identifier: 42522062

GI number: 42522062

Start: 426029

End: 426508

Strand: Direct

Name: 42522062

Synonym: Bd0453

Alternate gene names: NA

Gene position: 426029-426508 (Clockwise)

Preceding gene: 42522061

Following gene: 42522063

Centisome position: 11.26

GC content: 48.54

Gene sequence:

>480_bases
ATGCGATATTTGATGTTAGTGGTGATGGTCCTGACAGTTCTGTGGTCGGCGTATGGCCAGGCAATGCAGACGATGGAAGC
CAGTCGTATGAGCTTCCGCATTCAGCCCTTGGGCGGCAAAGGCTATGACTATTCGGCGATCTGGAATCCGATTAGTGAAA
CAGCGATGTTGCGCATTGGACTGGTGCTGAATTCTGCGGATGCATTTTTGGTGAACAAATCCATTTCATTTGCCACGGCC
AGTGCCGTTGATTTTGAAACCAGTGAGGGAATTTCTCGCCGGGGACATTGTGAAGTGGACCAGTGGTATTTGGAGTACGA
GCCGGGTCTTCCCAACTATTTGATGTATGTGGGAATGAAGGGGCCGGGCTGTGCGGATATTGCAAAGGAATTTGATATTT
TGCAGGTTCGCTTTAACTTTAAAGGAATTTCCCTGCCGCAGTTTGTACCCATTGACGTCGCTGTTGATATCAGTCGATAA

Upstream 100 bases:

>100_bases
ATGACTTCAAGAAAGGGATCCACACGGATCCCTTTCTTGCGTTTTGGGCCCTGGGGCCACTAGAACAAAGTCACCTGCGA
ATTTCACATGAGGGGGAATC

Downstream 100 bases:

>100_bases
ATAAGGGATGAGCAAGAAATCAGCTTTGATTCTATCCCTTGTTGCCGCCGTATTATTGATTTTTACCTTCTGCCATTTTT
ATGGCGACTCACCTGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRYLMLVVMVLTVLWSAYGQAMQTMEASRMSFRIQPLGGKGYDYSAIWNPISETAMLRIGLVLNSADAFLVNKSISFATA
SAVDFETSEGISRRGHCEVDQWYLEYEPGLPNYLMYVGMKGPGCADIAKEFDILQVRFNFKGISLPQFVPIDVAVDISR

Sequences:

>Translated_159_residues
MRYLMLVVMVLTVLWSAYGQAMQTMEASRMSFRIQPLGGKGYDYSAIWNPISETAMLRIGLVLNSADAFLVNKSISFATA
SAVDFETSEGISRRGHCEVDQWYLEYEPGLPNYLMYVGMKGPGCADIAKEFDILQVRFNFKGISLPQFVPIDVAVDISR
>Mature_159_residues
MRYLMLVVMVLTVLWSAYGQAMQTMEASRMSFRIQPLGGKGYDYSAIWNPISETAMLRIGLVLNSADAFLVNKSISFATA
SAVDFETSEGISRRGHCEVDQWYLEYEPGLPNYLMYVGMKGPGCADIAKEFDILQVRFNFKGISLPQFVPIDVAVDISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17811; Mature: 17811

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLMLVVMVLTVLWSAYGQAMQTMEASRMSFRIQPLGGKGYDYSAIWNPISETAMLRIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHCCHHHHHEEEEE
LVLNSADAFLVNKSISFATASAVDFETSEGISRRGHCEVDQWYLEYEPGLPNYLMYVGMK
EEECCCCEEEEECCCCEEEECEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECC
GPGCADIAKEFDILQVRFNFKGISLPQFVPIDVAVDISR
CCCHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRYLMLVVMVLTVLWSAYGQAMQTMEASRMSFRIQPLGGKGYDYSAIWNPISETAMLRIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHCCHHHHHEEEEE
LVLNSADAFLVNKSISFATASAVDFETSEGISRRGHCEVDQWYLEYEPGLPNYLMYVGMK
EEECCCCEEEEECCCCEEEECEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECC
GPGCADIAKEFDILQVRFNFKGISLPQFVPIDVAVDISR
CCCHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA