Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521989

Identifier: 42521989

GI number: 42521989

Start: 349891

End: 350628

Strand: Direct

Name: 42521989

Synonym: Bd0375

Alternate gene names: NA

Gene position: 349891-350628 (Clockwise)

Preceding gene: 42521988

Following gene: 42521990

Centisome position: 9.25

GC content: 51.36

Gene sequence:

>738_bases
ATGGCACGTAAACACGTCATCATCTTACTTGTTGTAATCACAGCGGTTGTGGCGCTTTCCTGGTTCCTAAAAAAGGATCA
GGAGCCGACTCTGGCTGAATCCCTGAAAGAGGCCGCCGATGTTGTTGCCTCTTCTGAAGACCGTCTAAGCGAAGAGGACA
TTGTTTTGCAATCCCCGAGCGCACAGATGCAGGTGACCGAGATACCTTCGCATGGCCAGAACCAGGCGGAAGAATCCCGC
CGTTTGCTGGAGCCGAAAAGAAAGCAGACTGTTTTACCCAAACCGGATGATCGTCGTCTGGCGCAGTCCTCAGTTCTGTC
CGGCAGTTCCTGGAAAGTGTGGGAGGGTGTGACCGCTTATCCGCAGTCCGCCGGCAAACGCAGTGCTTATCTGGCTGAAA
TTAACGGCTACTATCTGGTCGAAGAAGAAGGCTTCCGTGGCGATGACCGTCACTTTTCGGCGTCGCAGCCCTTGGCAGTT
TATAACGAACGCAAAGGGATTGCCGGAGTTGTGACGGGCACGATTCAGATCACGTTGAATGAAGGTGTGAATATCGATTC
CCTGATTCAGGAATATGACCTGAAAGTGGTGGGTGCGATGCCGGAGGCGAATTTGTACTTTGTGACCTCCGCACAGGACA
CTTTTAATTTGTCCTCTTTGAAAGAACGTTTAAGCAGCGAACCTGGCGTCAGTCAGACCCAGCTGGAGATTTTGAGCAGG
AAGTATGAAAAGTTTTAG

Upstream 100 bases:

>100_bases
GTCTCAATTCGGGAACACAGGCCGTTTCCATACTTTCCCAATACTTCTTGCAGAAAATAGTGAACGTGGCCCCCTTTTTA
ACGATAGAATTAAAGGACTC

Downstream 100 bases:

>100_bases
TCCCAAAGCCAAAATGCTGGCGGGCCTTGCAGTGATAGCCACTATCACGGGGACTTTATTTACCAACTGTGCGAAGAACA
GTTTCACCGCCGTTGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MARKHVIILLVVITAVVALSWFLKKDQEPTLAESLKEAADVVASSEDRLSEEDIVLQSPSAQMQVTEIPSHGQNQAEESR
RLLEPKRKQTVLPKPDDRRLAQSSVLSGSSWKVWEGVTAYPQSAGKRSAYLAEINGYYLVEEEGFRGDDRHFSASQPLAV
YNERKGIAGVVTGTIQITLNEGVNIDSLIQEYDLKVVGAMPEANLYFVTSAQDTFNLSSLKERLSSEPGVSQTQLEILSR
KYEKF

Sequences:

>Translated_245_residues
MARKHVIILLVVITAVVALSWFLKKDQEPTLAESLKEAADVVASSEDRLSEEDIVLQSPSAQMQVTEIPSHGQNQAEESR
RLLEPKRKQTVLPKPDDRRLAQSSVLSGSSWKVWEGVTAYPQSAGKRSAYLAEINGYYLVEEEGFRGDDRHFSASQPLAV
YNERKGIAGVVTGTIQITLNEGVNIDSLIQEYDLKVVGAMPEANLYFVTSAQDTFNLSSLKERLSSEPGVSQTQLEILSR
KYEKF
>Mature_244_residues
ARKHVIILLVVITAVVALSWFLKKDQEPTLAESLKEAADVVASSEDRLSEEDIVLQSPSAQMQVTEIPSHGQNQAEESRR
LLEPKRKQTVLPKPDDRRLAQSSVLSGSSWKVWEGVTAYPQSAGKRSAYLAEINGYYLVEEEGFRGDDRHFSASQPLAVY
NERKGIAGVVTGTIQITLNEGVNIDSLIQEYDLKVVGAMPEANLYFVTSAQDTFNLSSLKERLSSEPGVSQTQLEILSRK
YEKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27230; Mature: 27099

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKHVIILLVVITAVVALSWFLKKDQEPTLAESLKEAADVVASSEDRLSEEDIVLQSPS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEECCC
AQMQVTEIPSHGQNQAEESRRLLEPKRKQTVLPKPDDRRLAQSSVLSGSSWKVWEGVTAY
CCEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PQSAGKRSAYLAEINGYYLVEEEGFRGDDRHFSASQPLAVYNERKGIAGVVTGTIQITLN
CCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEC
EGVNIDSLIQEYDLKVVGAMPEANLYFVTSAQDTFNLSSLKERLSSEPGVSQTQLEILSR
CCCCHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
KYEKF
HHHCC
>Mature Secondary Structure 
ARKHVIILLVVITAVVALSWFLKKDQEPTLAESLKEAADVVASSEDRLSEEDIVLQSPS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCCCCEEEECCC
AQMQVTEIPSHGQNQAEESRRLLEPKRKQTVLPKPDDRRLAQSSVLSGSSWKVWEGVTAY
CCEEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PQSAGKRSAYLAEINGYYLVEEEGFRGDDRHFSASQPLAVYNERKGIAGVVTGTIQITLN
CCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEC
EGVNIDSLIQEYDLKVVGAMPEANLYFVTSAQDTFNLSSLKERLSSEPGVSQTQLEILSR
CCCCHHHHHHHHCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
KYEKF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA