| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is rhlE [H]
Identifier: 42521946
GI number: 42521946
Start: 308387
End: 309625
Strand: Direct
Name: rhlE [H]
Synonym: Bd0324
Alternate gene names: 42521946
Gene position: 308387-309625 (Clockwise)
Preceding gene: 42521943
Following gene: 42521949
Centisome position: 8.15
GC content: 48.83
Gene sequence:
>1239_bases GTGAAGTTTGAAAAGTTCCATTTGTCCGAAGATCTGCTGCGTAACCTGACCGACAATGGTTTCTTCAGAACCACCGACAT CCAGTACAAAGCCATTCCTTCCATTCTGAAGGGCGAGGACGTCCTGGCGATTGCTCAAACCGGAACCGGAAAAACCGCCG CCTTTGCCATTCCAATCATCAATATGATCCACACGGAAAAAAGCAGCAAACGTGCGATTGGGATCAAATGTCTGATTTTG GTTCCAACCCGTGAATTGGCTCAGCAGATCGGCGAGGTCTTCAATAAACTTTCCAAGCACACCAAGGTGAAGCCTTTTGC CCTGTTTGGGGGCGTGGAACAAGATGCGCAAATTCAGAAACTTCAGGACGGGATTGATATTCTGATTTCGACTCCGGGTC GCATGTTTGATCTGATTGCCCAAGGGCATGTGGACATCAGCCGCATTGAAACTTTGGTGCTGGATGAAGCCGATCACATG CTGGATCTGGGCTTTATTGATGACATCACCTCTGTGAAGCGCAAGCTGACGAAACGTCACCAGACTTTGTTCTTCTCTGC GACGATCAATCCTGAAATCAAAAAGCTGGCGTTTTCTCAAGTTCGCAGCAGTGCGATTCGCATTCAGATTTCCCCGGAAG ATCCCGTATCTAAAAACATCACGCACTTCGTGATGCACGTTGAAATGGACGACAAGCGTTTCTTCCTGGCGGAATACCTG CGCCAGAATCCGGATGGAAAATTTATTATCTTTGTTCGTACGCGCGTGCGTGCGGAACGTGTTGCAAAAGCCCTGGCTCG CGTCGAAGTTCAGTCTTTGACCCTGCATGGGGAAAAGGATCAGACCGACCGTGCGGAGGTTATGAAGACCTTCCGCAAAG GGGATTGTAAGATTCTTATCGCCACGGACTTGAGTGCTCGTGGTATCGACATCCCGGATGTCACTCATGTGATCAACTAT GACCTTCCCGAAAAGCCGGAGAACTACGTTCACCGCATCGGCCGCACGGGTCGTGGCTTCAATAAAGGTGTGGCGGTTTC TTTCTGCAGTACGGAAGAAAAGCCGTTGCTGGCAGAGGTTGAGTCTTTGATCACCAAAAAGATCGAAGTCCTTAAGGTCA GCAAACAGGATTATAAGGCTATCGTTGAAACACAAGACCTGTCTTTGGATGCAAGTCTGCAGGAGCTTTTGAACAGCGAA GACAACTACAAGAAGGCTTCCAAAAGAAAGAAGAAGTAG
Upstream 100 bases:
>100_bases TTGATGGGTAAATTCTGGAAATTTCTTCCTTTTTTCAATTAAAGGTCCCGCTTTTTCAGGCCCTGTGGTAGATGCTTCGT TTAATTCCAAGAGGTTTCCC
Downstream 100 bases:
>100_bases AACGGCGCCGAACGATCTGCCTAGTTCTTCTCTAAAAGTTCCTGGATCTTTTCAAAAGGACGTCCGATGGCAGCGGCTTT GCTGCCAATCAGGATCGGGC
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPIINMIHTEKSSKRAIGIKCLIL VPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQKLQDGIDILISTPGRMFDLIAQGHVDISRIETLVLDEADHM LDLGFIDDITSVKRKLTKRHQTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYL RQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILIATDLSARGIDIPDVTHVINY DLPEKPENYVHRIGRTGRGFNKGVAVSFCSTEEKPLLAEVESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSE DNYKKASKRKKK
Sequences:
>Translated_412_residues MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPIINMIHTEKSSKRAIGIKCLIL VPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQKLQDGIDILISTPGRMFDLIAQGHVDISRIETLVLDEADHM LDLGFIDDITSVKRKLTKRHQTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYL RQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILIATDLSARGIDIPDVTHVINY DLPEKPENYVHRIGRTGRGFNKGVAVSFCSTEEKPLLAEVESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSE DNYKKASKRKKK >Mature_412_residues MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPIINMIHTEKSSKRAIGIKCLIL VPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQKLQDGIDILISTPGRMFDLIAQGHVDISRIETLVLDEADHM LDLGFIDDITSVKRKLTKRHQTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYL RQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILIATDLSARGIDIPDVTHVINY DLPEKPENYVHRIGRTGRGFNKGVAVSFCSTEEKPLLAEVESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSE DNYKKASKRKKK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=391, Percent_Identity=36.8286445012788, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI216548263, Length=391, Percent_Identity=36.8286445012788, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI262231852, Length=391, Percent_Identity=36.8286445012788, Blast_Score=255, Evalue=7e-68, Organism=Homo sapiens, GI13518015, Length=391, Percent_Identity=36.8286445012788, Blast_Score=254, Evalue=7e-68, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=38.0281690140845, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=38.0281690140845, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=38.9645776566758, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=38.9645776566758, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI301171467, Length=432, Percent_Identity=36.1111111111111, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=36.3636363636364, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI169881239, Length=431, Percent_Identity=35.9628770301624, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI13514809, Length=431, Percent_Identity=35.9628770301624, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI7661920, Length=376, Percent_Identity=35.3723404255319, Blast_Score=229, Evalue=2e-60, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.6741573033708, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=37.4005305039788, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=36.8571428571429, Blast_Score=221, Evalue=7e-58, Organism=Homo sapiens, GI41327771, Length=375, Percent_Identity=34.9333333333333, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI83700235, Length=378, Percent_Identity=37.037037037037, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI50659095, Length=394, Percent_Identity=33.248730964467, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=34.0540540540541, Blast_Score=214, Evalue=8e-56, Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=33.9943342776204, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=33.9943342776204, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13129006, Length=369, Percent_Identity=34.1463414634146, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI224593278, Length=394, Percent_Identity=34.2639593908629, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI188035877, Length=365, Percent_Identity=34.5205479452055, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI38327634, Length=422, Percent_Identity=31.7535545023697, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=32.520325203252, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=33.1491712707182, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI31542656, Length=398, Percent_Identity=32.6633165829146, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI20149629, Length=367, Percent_Identity=30.7901907356948, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI51094101, Length=402, Percent_Identity=30.8457711442786, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI164419743, Length=402, Percent_Identity=30.8457711442786, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI13514831, Length=382, Percent_Identity=32.9842931937173, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI38569503, Length=369, Percent_Identity=32.2493224932249, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569505, Length=369, Percent_Identity=32.2493224932249, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI41327779, Length=361, Percent_Identity=34.3490304709141, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=31.5789473684211, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=30.25, Blast_Score=174, Evalue=9e-44, Organism=Homo sapiens, GI6005743, Length=384, Percent_Identity=33.59375, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI41327776, Length=367, Percent_Identity=28.6103542234332, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI8922886, Length=384, Percent_Identity=33.59375, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=32.9758713136729, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=30.1675977653631, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=29.5774647887324, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=29.5774647887324, Blast_Score=161, Evalue=8e-40, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=33.7874659400545, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=29.8342541436464, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI4826686, Length=383, Percent_Identity=28.9817232375979, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=31.2703583061889, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI62241024, Length=346, Percent_Identity=33.5260115606936, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=28.0487804878049, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI20336298, Length=203, Percent_Identity=40.3940886699507, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI256773275, Length=354, Percent_Identity=27.1186440677966, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI4557365, Length=340, Percent_Identity=25.8823529411765, Blast_Score=80, Evalue=4e-15, Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=41.4634146341463, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI87082221, Length=401, Percent_Identity=36.4089775561097, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1790214, Length=377, Percent_Identity=37.9310344827586, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI1788930, Length=356, Percent_Identity=37.0786516853933, Blast_Score=221, Evalue=9e-59, Organism=Escherichia coli, GI1787605, Length=398, Percent_Identity=35.1758793969849, Blast_Score=216, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=37.5, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71995724, Length=376, Percent_Identity=37.2340425531915, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=36.968085106383, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71995718, Length=386, Percent_Identity=37.8238341968912, Blast_Score=237, Evalue=7e-63, Organism=Caenorhabditis elegans, GI115533224, Length=331, Percent_Identity=39.5770392749245, Blast_Score=237, Evalue=9e-63, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=36.5789473684211, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17510307, Length=379, Percent_Identity=36.6754617414248, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=36.5789473684211, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=33.1578947368421, Blast_Score=225, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17537549, Length=388, Percent_Identity=34.020618556701, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17507877, Length=392, Percent_Identity=33.6734693877551, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17555296, Length=412, Percent_Identity=30.0970873786408, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=36.5921787709497, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=37.9008746355685, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17552114, Length=401, Percent_Identity=32.6683291770574, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI17507879, Length=422, Percent_Identity=31.5165876777251, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532546, Length=394, Percent_Identity=33.502538071066, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=36.3380281690141, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI115532548, Length=382, Percent_Identity=33.5078534031414, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI71999646, Length=379, Percent_Identity=30.6068601583113, Blast_Score=200, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=33.0749354005168, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=33.6021505376344, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999644, Length=379, Percent_Identity=30.6068601583113, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17505370, Length=407, Percent_Identity=30.2211302211302, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI25148203, Length=408, Percent_Identity=27.2058823529412, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=30.327868852459, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193208216, Length=388, Percent_Identity=32.4742268041237, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=30, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=30.1408450704225, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17553716, Length=374, Percent_Identity=29.9465240641711, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=30.6666666666667, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=29.6511627906977, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=31.9261213720317, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536101, Length=379, Percent_Identity=31.9261213720317, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=28.4974093264249, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=32.1899736147757, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.144385026738, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI193206561, Length=366, Percent_Identity=29.2349726775956, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=26.530612244898, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI25148291, Length=341, Percent_Identity=27.8592375366569, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71997889, Length=390, Percent_Identity=27.4358974358974, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=49.5145631067961, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=30.3030303030303, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324217, Length=366, Percent_Identity=37.9781420765027, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=369, Percent_Identity=35.7723577235772, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=402, Percent_Identity=35.0746268656716, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=37.027027027027, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=344, Percent_Identity=37.5, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=370, Percent_Identity=35.1351351351351, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=408, Percent_Identity=33.578431372549, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=380, Percent_Identity=36.3157894736842, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320041, Length=373, Percent_Identity=34.0482573726542, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=34.6478873239437, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=382, Percent_Identity=32.7225130890052, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=36.3881401617251, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=36.3881401617251, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=421, Percent_Identity=30.8788598574822, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=32.7176781002639, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=34.3575418994413, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=30.7486631016043, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=373, Percent_Identity=30.5630026809651, Blast_Score=176, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=427, Percent_Identity=30.2107728337237, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=373, Percent_Identity=34.3163538873995, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=30, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=421, Percent_Identity=32.541567695962, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321111, Length=353, Percent_Identity=31.4447592067989, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=27.2988505747126, Blast_Score=115, Evalue=9e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=159, Percent_Identity=35.2201257861635, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6321374, Length=164, Percent_Identity=29.2682926829268, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6323844, Length=345, Percent_Identity=24.6376811594203, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI17985987, Length=409, Percent_Identity=38.3863080684597, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI21355075, Length=382, Percent_Identity=38.4816753926702, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=36.8271954674221, Blast_Score=236, Evalue=3e-62, Organism=Drosophila melanogaster, GI24644479, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644483, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644487, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI45551833, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644485, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI281361218, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24644481, Length=352, Percent_Identity=36.6477272727273, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=36.1581920903955, Blast_Score=228, Evalue=5e-60, Organism=Drosophila melanogaster, GI24642151, Length=386, Percent_Identity=35.2331606217617, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI24645031, Length=376, Percent_Identity=36.436170212766, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=35.7340720221607, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=35.7541899441341, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17977678, Length=379, Percent_Identity=33.245382585752, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24584994, Length=375, Percent_Identity=33.6, Blast_Score=215, Evalue=3e-56, Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=36.6754617414248, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=36.6754617414248, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=36.6754617414248, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=36.6754617414248, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583279, Length=368, Percent_Identity=34.5108695652174, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI24583281, Length=368, Percent_Identity=34.5108695652174, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=33.9572192513369, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24585582, Length=384, Percent_Identity=30.7291666666667, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI17136814, Length=415, Percent_Identity=32.0481927710843, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI28571808, Length=336, Percent_Identity=33.0357142857143, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI28571809, Length=336, Percent_Identity=33.0357142857143, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=33.8658146964856, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=29.4594594594595, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=33.1476323119777, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI20130173, Length=475, Percent_Identity=28, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI21355559, Length=394, Percent_Identity=33.502538071066, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24642822, Length=393, Percent_Identity=29.2620865139949, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI17647335, Length=385, Percent_Identity=31.1688311688312, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=29.6675191815857, Blast_Score=158, Evalue=5e-39, Organism=Drosophila melanogaster, GI24581954, Length=367, Percent_Identity=30.5177111716621, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24581952, Length=367, Percent_Identity=30.5177111716621, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24581956, Length=367, Percent_Identity=30.5177111716621, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920478, Length=344, Percent_Identity=29.3604651162791, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24668515, Length=384, Percent_Identity=28.6458333333333, Blast_Score=131, Evalue=9e-31, Organism=Drosophila melanogaster, GI18859659, Length=211, Percent_Identity=34.5971563981043, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI28571338, Length=211, Percent_Identity=34.5971563981043, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24640164, Length=389, Percent_Identity=26.2210796915167, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI17136666, Length=415, Percent_Identity=26.2650602409639, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI24646066, Length=356, Percent_Identity=25.8426966292135, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46589; Mature: 46589
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPII CCCCHHCCCHHHHHHCCCCCCEEECCCCHHHCCHHHCCCCEEEEEECCCCCCEEEHHHHH NMIHTEKSSKRAIGIKCLILVPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQK HHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH LQDGIDILISTPGRMFDLIAQGHVDISRIETLVLDEADHMLDLGFIDDITSVKRKLTKRH HHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH QTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYL HEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHH RQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILI HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCEEEEE ATDLSARGIDIPDVTHVINYDLPEKPENYVHRIGRTGRGFNKGVAVSFCSTEEKPLLAEV EECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHH ESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSEDNYKKASKRKKK HHHHHHHHHHEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTGKTAAFAIPII CCCCHHCCCHHHHHHCCCCCCEEECCCCHHHCCHHHCCCCEEEEEECCCCCCEEEHHHHH NMIHTEKSSKRAIGIKCLILVPTRELAQQIGEVFNKLSKHTKVKPFALFGGVEQDAQIQK HHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH LQDGIDILISTPGRMFDLIAQGHVDISRIETLVLDEADHMLDLGFIDDITSVKRKLTKRH HHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH QTLFFSATINPEIKKLAFSQVRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYL HEEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHH RQNPDGKFIIFVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILI HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCEEEEE ATDLSARGIDIPDVTHVINYDLPEKPENYVHRIGRTGRGFNKGVAVSFCSTEEKPLLAEV EECCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHH ESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSEDNYKKASKRKKK HHHHHHHHHHEEECHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]