Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521931

Identifier: 42521931

GI number: 42521931

Start: 297450

End: 298064

Strand: Direct

Name: 42521931

Synonym: Bd0308

Alternate gene names: NA

Gene position: 297450-298064 (Clockwise)

Preceding gene: 42521930

Following gene: 42521934

Centisome position: 7.86

GC content: 51.06

Gene sequence:

>615_bases
ATGTTGAATGAAAATCCTCTGGGCGAAATTCAAAAAATTGAAAACGATATTTATCGGTTGCAGCGTCGACTGGAAGCCTT
AAGAAAAGAAAACCCTCCGCTGGAAGTCAAAAACTACATCTTCAAAAATCTGAACGGGGAAGTCACTTTGCGCGATCTTT
TTGATGGCAAGGACCGACTGCTGGCCATTCATAATATGGGACAGGGATGTCGCTCCTGCACACTGTGGGCGGATGGCTAC
AATGCTTTTTTGCCTGCGCTGGAAGAACAGTTCACTGTTGTGCTTTTTTCAAAAGACGCCCCGGAAGTGCAGCGTCGTTT
TGCCAATGACCGTGGCTGGCGTTTTAATATGGTGTCTCATGGGGGCGGTCTTTATATCCGTGAACAAAGTGTGGTGCCGG
GCAGGAACAATATGCCGGGACTGGTGTACTACGAACGGCGCGGAGAGCGGATCTTCAAAAAAAACAGCAGCGTGGTGGGA
CCTGGGGATACCTTTTGCCCGGTGTGGAGTCTGCTCAGTCTGGCCGGCATCGGCATGGATGAGTGGACGCCCCAGTACCG
TTACTGGAGCCGCCCGGAAAGACTGGACGACGGCGGTATGAATCTGAGTCTTTAG

Upstream 100 bases:

>100_bases
CAAACTGACATGATTGAGAGATGCTGTTGCAGGACCACTGACAGAAAACAGCCGGACAAAGCGCATTCTTCTTTCTAGAA
TAAAAAAAGGGGGGGCGTTT

Downstream 100 bases:

>100_bases
CCGAATTTCCCGGCTTGATAGTCTTCAATGGCCTCGATGATTTCTGCTTTGGTGTTCATCACAAACGGTCCGTGTGAAAT
CACGGGCTCATTGAAAGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLNENPLGEIQKIENDIYRLQRRLEALRKENPPLEVKNYIFKNLNGEVTLRDLFDGKDRLLAIHNMGQGCRSCTLWADGY
NAFLPALEEQFTVVLFSKDAPEVQRRFANDRGWRFNMVSHGGGLYIREQSVVPGRNNMPGLVYYERRGERIFKKNSSVVG
PGDTFCPVWSLLSLAGIGMDEWTPQYRYWSRPERLDDGGMNLSL

Sequences:

>Translated_204_residues
MLNENPLGEIQKIENDIYRLQRRLEALRKENPPLEVKNYIFKNLNGEVTLRDLFDGKDRLLAIHNMGQGCRSCTLWADGY
NAFLPALEEQFTVVLFSKDAPEVQRRFANDRGWRFNMVSHGGGLYIREQSVVPGRNNMPGLVYYERRGERIFKKNSSVVG
PGDTFCPVWSLLSLAGIGMDEWTPQYRYWSRPERLDDGGMNLSL
>Mature_204_residues
MLNENPLGEIQKIENDIYRLQRRLEALRKENPPLEVKNYIFKNLNGEVTLRDLFDGKDRLLAIHNMGQGCRSCTLWADGY
NAFLPALEEQFTVVLFSKDAPEVQRRFANDRGWRFNMVSHGGGLYIREQSVVPGRNNMPGLVYYERRGERIFKKNSSVVG
PGDTFCPVWSLLSLAGIGMDEWTPQYRYWSRPERLDDGGMNLSL

Specific function: Unknown

COG id: COG4312

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23549; Mature: 23549

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNENPLGEIQKIENDIYRLQRRLEALRKENPPLEVKNYIFKNLNGEVTLRDLFDGKDRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCEE
LAIHNMGQGCRSCTLWADGYNAFLPALEEQFTVVLFSKDAPEVQRRFANDRGWRFNMVSH
EEEECCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEC
GGGLYIREQSVVPGRNNMPGLVYYERRGERIFKKNSSVVGPGDTFCPVWSLLSLAGIGMD
CCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
EWTPQYRYWSRPERLDDGGMNLSL
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNENPLGEIQKIENDIYRLQRRLEALRKENPPLEVKNYIFKNLNGEVTLRDLFDGKDRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCEE
LAIHNMGQGCRSCTLWADGYNAFLPALEEQFTVVLFSKDAPEVQRRFANDRGWRFNMVSH
EEEECCCCCCCEEEEEECCHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEC
GGGLYIREQSVVPGRNNMPGLVYYERRGERIFKKNSSVVGPGDTFCPVWSLLSLAGIGMD
CCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
EWTPQYRYWSRPERLDDGGMNLSL
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA