| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is qor [H]
Identifier: 42521928
GI number: 42521928
Start: 294495
End: 295475
Strand: Direct
Name: qor [H]
Synonym: Bd0305
Alternate gene names: 42521928
Gene position: 294495-295475 (Clockwise)
Preceding gene: 42521926
Following gene: 42521930
Centisome position: 7.78
GC content: 55.25
Gene sequence:
>981_bases ATGCGTGCAGTTGAAATCACCCAACCCGGCGGACCTGAAGTTTTAAAAATCACCGAACGAACCAAGCCTGAACCTGCCAT CGGCGAAGTGCTGATCGAGATCCATGCCTCGGGTGTGAATCGTCCGGACTGCGCGCAAAGACAGGGAACTTATCCACCAC CTCCGGGGGCCTCCGATATTCCGGGGCTTGAGATTGCCGGAAAGATTGTGGCCGTGGGTGCGGGTGTCAGCAAATGGAAA GTCGGCGACATGGTGTGTGCGCTGGTTTCTGGTGGTGGTTATGCTGAATACGTTGCGGCCCCTGAGGGGCAGTGCCTGCC TGTTCCAACGGGAATGAGTGTTGTTGAAGCCGCCGCTTTGCCAGAGACCTTCTTCACCGTTTGGACCAACTTGTTTGAAA GCGGTCGCCTGCAAAAAGGCGAAAGTGTTCTGATTCACGGCGGAGCCGGCGGCATCGGCACGACGGCCATTCAAATGGCC TCGGCCATGGGTGTGCGGGTTTTCACGACGGTGGGGAAAAAGGAATCCGTATCGATATGTCAGGAGCTGGGGGCTGAACG AGTGATCCTGTACAAGGAAGAGGATTTTGTCAGTGTGGTGAAATCACTTACGGCTGACAAGGGTGTGGATGTGATTCTGG ATATGGTGGGTGGGGATTACTTTGCCCGCAATATTGAGGCCCTGGCCGTCCAGGGGCGGCTGGTGCAGATCGCAACGATG CAAGGGGCGAAGGTGGAGCTGGATTTGCGCAAAGTGATGTTTAAGCGTCTGACTTTGACAGGTTCAACCCTGCGCGCACG CCCGGTCGCAGAAAAATCCCGCATTGCCACGGCGTTGTTGCAGAATATCTGGCCGCTCTTGAATAAAAATCAAATGCGAC CGGTGATTTATAAAGTTTTGAAACTGGAACAGGCCGCTGAGGCCCACGCGATGATGGAAGCCAGTCAGCACACCGGAAAG ATTGTGCTGACGACCCGTTAG
Upstream 100 bases:
>100_bases GGGCTTAACGCCCGGCAACTGGCCTATGGCCCAGTTTCAAAGTCTTGACGACGGAAAAACAGGGGCGCATTTTGAATTAT TCCCAGAAGGAGTCACTTTC
Downstream 100 bases:
>100_bases ACAAGTTTATTCCAAGTGCTCTCTTTGACGGGAGCTCTTGTCGCATTTGCCGGTGAAGGCATGATTCACAGCGCGCTGTT TCGGCGCGTTTTCAAAGAAG
Product: quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRAVEITQPGGPEVLKITERTKPEPAIGEVLIEIHASGVNRPDCAQRQGTYPPPPGASDIPGLEIAGKIVAVGAGVSKWK VGDMVCALVSGGGYAEYVAAPEGQCLPVPTGMSVVEAAALPETFFTVWTNLFESGRLQKGESVLIHGGAGGIGTTAIQMA SAMGVRVFTTVGKKESVSICQELGAERVILYKEEDFVSVVKSLTADKGVDVILDMVGGDYFARNIEALAVQGRLVQIATM QGAKVELDLRKVMFKRLTLTGSTLRARPVAEKSRIATALLQNIWPLLNKNQMRPVIYKVLKLEQAAEAHAMMEASQHTGK IVLTTR
Sequences:
>Translated_326_residues MRAVEITQPGGPEVLKITERTKPEPAIGEVLIEIHASGVNRPDCAQRQGTYPPPPGASDIPGLEIAGKIVAVGAGVSKWK VGDMVCALVSGGGYAEYVAAPEGQCLPVPTGMSVVEAAALPETFFTVWTNLFESGRLQKGESVLIHGGAGGIGTTAIQMA SAMGVRVFTTVGKKESVSICQELGAERVILYKEEDFVSVVKSLTADKGVDVILDMVGGDYFARNIEALAVQGRLVQIATM QGAKVELDLRKVMFKRLTLTGSTLRARPVAEKSRIATALLQNIWPLLNKNQMRPVIYKVLKLEQAAEAHAMMEASQHTGK IVLTTR >Mature_326_residues MRAVEITQPGGPEVLKITERTKPEPAIGEVLIEIHASGVNRPDCAQRQGTYPPPPGASDIPGLEIAGKIVAVGAGVSKWK VGDMVCALVSGGGYAEYVAAPEGQCLPVPTGMSVVEAAALPETFFTVWTNLFESGRLQKGESVLIHGGAGGIGTTAIQMA SAMGVRVFTTVGKKESVSICQELGAERVILYKEEDFVSVVKSLTADKGVDVILDMVGGDYFARNIEALAVQGRLVQIATM QGAKVELDLRKVMFKRLTLTGSTLRARPVAEKSRIATALLQNIWPLLNKNQMRPVIYKVLKLEQAAEAHAMMEASQHTGK IVLTTR
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=328, Percent_Identity=40.8536585365854, Blast_Score=254, Evalue=8e-68, Organism=Homo sapiens, GI22538444, Length=328, Percent_Identity=40.8536585365854, Blast_Score=254, Evalue=8e-68, Organism=Homo sapiens, GI194239674, Length=329, Percent_Identity=33.7386018237082, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI13236495, Length=329, Percent_Identity=33.7386018237082, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI194239676, Length=329, Percent_Identity=31.6109422492401, Blast_Score=141, Evalue=7e-34, Organism=Homo sapiens, GI24308257, Length=341, Percent_Identity=29.0322580645161, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI18379349, Length=340, Percent_Identity=30.8823529411765, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI28557745, Length=234, Percent_Identity=34.1880341880342, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI197927207, Length=198, Percent_Identity=30.3030303030303, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI41872631, Length=310, Percent_Identity=26.4516129032258, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI47519420, Length=370, Percent_Identity=26.4864864864865, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI67078404, Length=244, Percent_Identity=27.4590163934426, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI67078406, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1790485, Length=247, Percent_Identity=35.2226720647773, Blast_Score=132, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17507255, Length=309, Percent_Identity=29.126213592233, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17536829, Length=256, Percent_Identity=28.515625, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71987554, Length=350, Percent_Identity=26.5714285714286, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI212642053, Length=308, Percent_Identity=25.6493506493506, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=329, Percent_Identity=29.1793313069909, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323961, Length=334, Percent_Identity=28.4431137724551, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6324486, Length=334, Percent_Identity=27.8443113772455, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=332, Percent_Identity=26.2048192771084, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319621, Length=282, Percent_Identity=26.9503546099291, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI221330659, Length=269, Percent_Identity=26.0223048327138, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI19920632, Length=269, Percent_Identity=26.0223048327138, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24581345, Length=269, Percent_Identity=25.6505576208178, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI45550423, Length=266, Percent_Identity=26.6917293233083, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34777; Mature: 34777
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVEITQPGGPEVLKITERTKPEPAIGEVLIEIHASGVNRPDCAQRQGTYPPPPGASDI CCEEEECCCCCCCEEEEECCCCCCCCHHHEEEEEECCCCCCCCHHHCCCCCCCCCCCCCC PGLEIAGKIVAVGAGVSKWKVGDMVCALVSGGGYAEYVAAPEGQCLPVPTGMSVVEAAAL CCCHHCCEEEEECCCCCCCCHHHHHEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHC PETFFTVWTNLFESGRLQKGESVLIHGGAGGIGTTAIQMASAMGVRVFTTVGKKESVSIC HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHH QELGAERVILYKEEDFVSVVKSLTADKGVDVILDMVGGDYFARNIEALAVQGRLVQIATM HHCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCHHEEEECCEEEEEEEC QGAKVELDLRKVMFKRLTLTGSTLRARPVAEKSRIATALLQNIWPLLNKNQMRPVIYKVL CCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KLEQAAEAHAMMEASQHTGKIVLTTR HHHHHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MRAVEITQPGGPEVLKITERTKPEPAIGEVLIEIHASGVNRPDCAQRQGTYPPPPGASDI CCEEEECCCCCCCEEEEECCCCCCCCHHHEEEEEECCCCCCCCHHHCCCCCCCCCCCCCC PGLEIAGKIVAVGAGVSKWKVGDMVCALVSGGGYAEYVAAPEGQCLPVPTGMSVVEAAAL CCCHHCCEEEEECCCCCCCCHHHHHEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHC PETFFTVWTNLFESGRLQKGESVLIHGGAGGIGTTAIQMASAMGVRVFTTVGKKESVSIC HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHH QELGAERVILYKEEDFVSVVKSLTADKGVDVILDMVGGDYFARNIEALAVQGRLVQIATM HHCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCHHEEEECCEEEEEEEC QGAKVELDLRKVMFKRLTLTGSTLRARPVAEKSRIATALLQNIWPLLNKNQMRPVIYKVL CCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KLEQAAEAHAMMEASQHTGKIVLTTR HHHHHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]