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The map label for this gene is phnD [C]

Identifier: 42521925

GI number: 42521925

Start: 292438

End: 293355

Strand: Direct

Name: phnD [C]

Synonym: Bd0302

Alternate gene names: 42521925

Gene position: 292438-293355 (Clockwise)

Preceding gene: 42521920

Following gene: 42521926

Centisome position: 7.73

GC content: 51.85

Gene sequence:

>918_bases
ATGAGAAATTTTCAGGAGAGCCCTTTGCTAAAGCATTTGCTGGTATATTTTTTACCGGTTTTTTTGATTACATGCACGTC
ACAAAAGGAACTGGGAAGTCGTGAGAAGCCCATTCAATTTGCATTGGTGCCGGGCCAGGATTCCGCCGTTCTTATGGAGA
ATGGAAAGCTGCTGGAAAAATGGATTCTGGAAAAATCCGGGCTGCATGTGCGCATGCAAGTGCCGGTCAGCTATGTCGCT
GTGGTTGAGGCGATTGGCTCGCAGCGGGTGGATGTGGCGATCCTAAATACGTTCGGCTATCTTTTGGCCCACGACAGGTA
TGGGGCGCAGGCAAAGCTGATTGGTGTGAACCGCGGCACTTCGGAATACTGGGGCCAGATCATCACGGCCGATCCGAAAA
TCAAGTCTCTGAACGATCTGCAAGGAAAGAAATTTGCCTTCGTGGATCCGGCATCGACGTCAGGGTATGTCCTGCCAGCG
AAGCTTTTCAAAGATCATAGTATCAAGCTGGCCGAAACGGTGTTTGCCGGTAAACACGACAGCGTGGTGACGATGGTGTA
TCAGGGGCGCGTGCATGCCGGGGCGACTTATCACACGCCTTCCGAAGACGGAGTTCCTCAGGATGCGCGCCGACTGGTGA
AAGAACAGTTTCCAGACGTCTATGAAAAAGTGCGGATTATTCAGAAGACCGACTCCATTCCCAGTGATCCGGTGGTGTTT
CGCAAGGACTTTCCGGCCGATATCGGGGCTCGGTTGATCGCGGCACTGAAAAGTTTCCCGTCCACTCCGGAAGGGGCCAA
AGCACTGAAAAACCTCTATCACCTGGAGGGATTCAAGGATTGCTCGGACAAAGACTATGAACAAGCCCGCAAAATCCTGC
TGGAAATAAGCCAGCAGGTTCAGGAACCCGCAAAGTAA

Upstream 100 bases:

>100_bases
TTTCCATGCCCTCCTTATCCTCGAAAACCGCTCATGTTTACAATTCATATTAGTTTATGACAGTGTTTATTGCATACATT
TAATACCAAGAGTAAATTCG

Downstream 100 bases:

>100_bases
TCAGTGACTTACGGTCTTTTCGCACTCGACCTTGAAAAAACGGGCTGAGTGCGGTTTAATAACCTAATGAGCCGCGCAAC
ATTCGCAAATCTTATTCTAA

Product: phosphonates-binding protein

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: Methyl-Accepting Chemotaxis Sensory Transducer; Methyl-Accepting Chemotaxis Protein; Alkylphosphonate ABC Transporter; Phosphonate ABC Transporter Periplasmic; Alkylphosphonate ABC Tranporter; ABC Transporter Periplasmic Protein; Phosphonates Transport System; Phosphonate ABC Transporter Periplasmic Component; ABC-Type Phosphate/Phosphonate Transport System Protein; ABC-Type Phosphate/Phosphonate Transporter

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MRNFQESPLLKHLLVYFLPVFLITCTSQKELGSREKPIQFALVPGQDSAVLMENGKLLEKWILEKSGLHVRMQVPVSYVA
VVEAIGSQRVDVAILNTFGYLLAHDRYGAQAKLIGVNRGTSEYWGQIITADPKIKSLNDLQGKKFAFVDPASTSGYVLPA
KLFKDHSIKLAETVFAGKHDSVVTMVYQGRVHAGATYHTPSEDGVPQDARRLVKEQFPDVYEKVRIIQKTDSIPSDPVVF
RKDFPADIGARLIAALKSFPSTPEGAKALKNLYHLEGFKDCSDKDYEQARKILLEISQQVQEPAK

Sequences:

>Translated_305_residues
MRNFQESPLLKHLLVYFLPVFLITCTSQKELGSREKPIQFALVPGQDSAVLMENGKLLEKWILEKSGLHVRMQVPVSYVA
VVEAIGSQRVDVAILNTFGYLLAHDRYGAQAKLIGVNRGTSEYWGQIITADPKIKSLNDLQGKKFAFVDPASTSGYVLPA
KLFKDHSIKLAETVFAGKHDSVVTMVYQGRVHAGATYHTPSEDGVPQDARRLVKEQFPDVYEKVRIIQKTDSIPSDPVVF
RKDFPADIGARLIAALKSFPSTPEGAKALKNLYHLEGFKDCSDKDYEQARKILLEISQQVQEPAK
>Mature_305_residues
MRNFQESPLLKHLLVYFLPVFLITCTSQKELGSREKPIQFALVPGQDSAVLMENGKLLEKWILEKSGLHVRMQVPVSYVA
VVEAIGSQRVDVAILNTFGYLLAHDRYGAQAKLIGVNRGTSEYWGQIITADPKIKSLNDLQGKKFAFVDPASTSGYVLPA
KLFKDHSIKLAETVFAGKHDSVVTMVYQGRVHAGATYHTPSEDGVPQDARRLVKEQFPDVYEKVRIIQKTDSIPSDPVVF
RKDFPADIGARLIAALKSFPSTPEGAKALKNLYHLEGFKDCSDKDYEQARKILLEISQQVQEPAK

Specific function: Part Of The Binding-Protein-Dependent Transport System For Alkylphosphonates. [C]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790543, Length=268, Percent_Identity=25.7462686567164, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34029; Mature: 34029

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFQESPLLKHLLVYFLPVFLITCTSQKELGSREKPIQFALVPGQDSAVLMENGKLLEK
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHH
WILEKSGLHVRMQVPVSYVAVVEAIGSQRVDVAILNTFGYLLAHDRYGAQAKLIGVNRGT
HHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCC
SEYWGQIITADPKIKSLNDLQGKKFAFVDPASTSGYVLPAKLFKDHSIKLAETVFAGKHD
HHHCCEEEECCCCCCCHHHCCCCEEEEECCCCCCCEEEEHHHHCCCCCHHHHHHHCCCCC
SVVTMVYQGRVHAGATYHTPSEDGVPQDARRLVKEQFPDVYEKVRIIQKTDSIPSDPVVF
CEEEEEEECCEECCCEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEE
RKDFPADIGARLIAALKSFPSTPEGAKALKNLYHLEGFKDCSDKDYEQARKILLEISQQV
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QEPAK
HCCCC
>Mature Secondary Structure
MRNFQESPLLKHLLVYFLPVFLITCTSQKELGSREKPIQFALVPGQDSAVLMENGKLLEK
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHH
WILEKSGLHVRMQVPVSYVAVVEAIGSQRVDVAILNTFGYLLAHDRYGAQAKLIGVNRGT
HHHHCCCCEEEEECCHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCC
SEYWGQIITADPKIKSLNDLQGKKFAFVDPASTSGYVLPAKLFKDHSIKLAETVFAGKHD
HHHCCEEEECCCCCCCHHHCCCCEEEEECCCCCCCEEEEHHHHCCCCCHHHHHHHCCCCC
SVVTMVYQGRVHAGATYHTPSEDGVPQDARRLVKEQFPDVYEKVRIIQKTDSIPSDPVVF
CEEEEEEECCEECCCEECCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEE
RKDFPADIGARLIAALKSFPSTPEGAKALKNLYHLEGFKDCSDKDYEQARKILLEISQQV
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QEPAK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA