Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521915

Identifier: 42521915

GI number: 42521915

Start: 276807

End: 277532

Strand: Direct

Name: 42521915

Synonym: Bd0292

Alternate gene names: NA

Gene position: 276807-277532 (Clockwise)

Preceding gene: 42521913

Following gene: 42521916

Centisome position: 7.32

GC content: 46.69

Gene sequence:

>726_bases
ATGCCCAATCGCTTTATCTTTTCTCTGCGTTTTTCCTCTAAAGTATTTCTGAAAATGGCAGTCCTGGCTTTTGCCATGAT
CGTCTTCATGACCTTATTCCGACTGAATCTCTATTTTCTTTCGGTCTTTCATGCGACTCCGGATGCGGCGTTTGTTGAAA
TTGCCCAGTCCTTCCTGGCCGGCTTCCGTTTTGATCTTTTGATTTTTGGATTTCTTTTTATCCCGCTATATTTTCTGGTG
ATGATTCAGGCGGTTTTGCAGAAATGGCCGCGCGCAGGCTTTCTGTTTTATAAAGTCTATTTCACGATTGTCTGGTTCCT
GATCTGCGCGTTGACGTTTGTGGACTTCTTCCATTTCGCGAAGTACGGAAAACGCATGTGTTTTGCGGATTACAATTCCT
GGAACATGCAAAGCTGGCTGGAACAGTTCCAGTCCATGCCGCCGAACCAGTCCTGGATCTTCTGTATCATCACAGTTCTT
TTGTTCAGCCTTGGATACATGCTGGTGAAAAGCCTTAAGTTCGGGGAGTGGAAAGACGAGTATTCTCCACAGGCCGGGTC
GAAGTTTGAAGTCCTGTGGCGTGTGCTGCTTCCCCTGGTGATGATTGTTTTGGCCGCTCGTGGAACCGTTGAAGCACACC
ATCTGGCTTTGGAGCACAGCGAGGTGTCGCTGGATAAGGTTATAAACGAGATGGCACTAAATGCTGTGTGGTGTTTTGAT
AAGTAA

Upstream 100 bases:

>100_bases
GCTTCGAAAATAGTTGTAAAGTACTATCGAGGACATATACTGACTCCTATTGAGCCTCACATTTCATTCTGCTTTTGATT
TTCAGTCAAAGGACTTTTCG

Downstream 100 bases:

>100_bases
TTAAAATTATGGGACTATTTGAGGGCTTCAATGAAAGCCTTTAGGAGGATTAAAATGAAAAAGTTGGCTCTAACAGTGAT
GGCGGTTTTGGGTATGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MPNRFIFSLRFSSKVFLKMAVLAFAMIVFMTLFRLNLYFLSVFHATPDAAFVEIAQSFLAGFRFDLLIFGFLFIPLYFLV
MIQAVLQKWPRAGFLFYKVYFTIVWFLICALTFVDFFHFAKYGKRMCFADYNSWNMQSWLEQFQSMPPNQSWIFCIITVL
LFSLGYMLVKSLKFGEWKDEYSPQAGSKFEVLWRVLLPLVMIVLAARGTVEAHHLALEHSEVSLDKVINEMALNAVWCFD
K

Sequences:

>Translated_241_residues
MPNRFIFSLRFSSKVFLKMAVLAFAMIVFMTLFRLNLYFLSVFHATPDAAFVEIAQSFLAGFRFDLLIFGFLFIPLYFLV
MIQAVLQKWPRAGFLFYKVYFTIVWFLICALTFVDFFHFAKYGKRMCFADYNSWNMQSWLEQFQSMPPNQSWIFCIITVL
LFSLGYMLVKSLKFGEWKDEYSPQAGSKFEVLWRVLLPLVMIVLAARGTVEAHHLALEHSEVSLDKVINEMALNAVWCFD
K
>Mature_240_residues
PNRFIFSLRFSSKVFLKMAVLAFAMIVFMTLFRLNLYFLSVFHATPDAAFVEIAQSFLAGFRFDLLIFGFLFIPLYFLVM
IQAVLQKWPRAGFLFYKVYFTIVWFLICALTFVDFFHFAKYGKRMCFADYNSWNMQSWLEQFQSMPPNQSWIFCIITVLL
FSLGYMLVKSLKFGEWKDEYSPQAGSKFEVLWRVLLPLVMIVLAARGTVEAHHLALEHSEVSLDKVINEMALNAVWCFDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28286; Mature: 28155

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
PNRFIFSLRFSSKVFLKMAVLAFAMIVFMTLFRLNLYFLSVFHATPDAAFVEIAQSFLA
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GFRFDLLIFGFLFIPLYFLVMIQAVLQKWPRAGFLFYKVYFTIVWFLICALTFVDFFHFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYGKRMCFADYNSWNMQSWLEQFQSMPPNQSWIFCIITVLLFSLGYMLVKSLKFGEWKDE
HHCCCEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YSPQAGSKFEVLWRVLLPLVMIVLAARGTVEAHHLALEHSEVSLDKVINEMALNAVWCFD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA