Click here to switch to the map view.

The map label for this gene is 42521898

Identifier: 42521898

GI number: 42521898

Start: 262330

End: 262773

Strand: Direct

Name: 42521898

Synonym: Bd0275

Alternate gene names: NA

Gene position: 262330-262773 (Clockwise)

Preceding gene: 42521897

Following gene: 42521904

Centisome position: 6.93

GC content: 49.77

Gene sequence:

>444_bases
ATGCTCCGATATGCGGCTATACCGTTGATTTCGCTTGGCCTGATGCTGTCTGCCTGCCAGACATCCATGCTGAAGCAGTT
TGAAGAAATCACGCCAGGAATGGAAAAAGACGACGTTCTGGATCTGATGGGCAGCCCCACCCAAACTCAAAGATTTCATG
GCAAAGACCGCTGGACTTATGTGTTCTATGATAAGCGCATCAAGTTTGTGAAAGAAGTGCAGTTCTTTGAAGGCAACGCC
ATCTATGTTGGTGATGTCTGGCAGCCGCCGGCTGAAAAGAATGCCGTGGCCATGGATTCACTGAACGATCGCAAGAACCG
CGAGATCGACGAACAGATCGCCCGCGATGTGGAAGGTCACCGTCGTTCCTATGATGAGTATGAAAAGAAATCCAAAGGCG
AAGACAAGGTTCGTTACGTTCCGGATTTCGAGCCGGTTCGTTAA

Upstream 100 bases:

>100_bases
TCCTGAAAAAATAAAAATCCCTGTCCCAGTTTGAGACAAAAGAAAGTTGCTCGCTTTCGAGGAACGGGCGAAGCTGGTAC
CTTAGAAGAATGGGGGAAGT

Downstream 100 bases:

>100_bases
GTACTTACTGCCCCTGAGGCAACACCAGGGGTTCACCCAAGACGGAGATCACTTCATAGCCGGTGATCTCTAAAGTGTCC
GAGGGATCTTTCCCGTAAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLRYAAIPLISLGLMLSACQTSMLKQFEEITPGMEKDDVLDLMGSPTQTQRFHGKDRWTYVFYDKRIKFVKEVQFFEGNA
IYVGDVWQPPAEKNAVAMDSLNDRKNREIDEQIARDVEGHRRSYDEYEKKSKGEDKVRYVPDFEPVR

Sequences:

>Translated_147_residues
MLRYAAIPLISLGLMLSACQTSMLKQFEEITPGMEKDDVLDLMGSPTQTQRFHGKDRWTYVFYDKRIKFVKEVQFFEGNA
IYVGDVWQPPAEKNAVAMDSLNDRKNREIDEQIARDVEGHRRSYDEYEKKSKGEDKVRYVPDFEPVR
>Mature_147_residues
MLRYAAIPLISLGLMLSACQTSMLKQFEEITPGMEKDDVLDLMGSPTQTQRFHGKDRWTYVFYDKRIKFVKEVQFFEGNA
IYVGDVWQPPAEKNAVAMDSLNDRKNREIDEQIARDVEGHRRSYDEYEKKSKGEDKVRYVPDFEPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17233; Mature: 17233

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYAAIPLISLGLMLSACQTSMLKQFEEITPGMEKDDVLDLMGSPTQTQRFHGKDRWTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCEEE
VFYDKRIKFVKEVQFFEGNAIYVGDVWQPPAEKNAVAMDSLNDRKNREIDEQIARDVEGH
EEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH
RRSYDEYEKKSKGEDKVRYVPDFEPVR
HCCHHHHHHHCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MLRYAAIPLISLGLMLSACQTSMLKQFEEITPGMEKDDVLDLMGSPTQTQRFHGKDRWTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHCCCCCCEEE
VFYDKRIKFVKEVQFFEGNAIYVGDVWQPPAEKNAVAMDSLNDRKNREIDEQIARDVEGH
EEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH
RRSYDEYEKKSKGEDKVRYVPDFEPVR
HCCHHHHHHHCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA