Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521881

Identifier: 42521881

GI number: 42521881

Start: 245742

End: 246716

Strand: Direct

Name: 42521881

Synonym: Bd0256

Alternate gene names: NA

Gene position: 245742-246716 (Clockwise)

Preceding gene: 42521876

Following gene: 42521883

Centisome position: 6.5

GC content: 50.97

Gene sequence:

>975_bases
ATGAGGGTTTTTTCGTTTCTTTTTTGTTTATTTCTGATTTCTCCGGGCCATGCCGAGGAAACACCAAACCCAAGTCCACA
GCCCATTTCCCAGGAAAACCCGATGCCGGTGCCGGCCCCGCAAACCGGGGTTGTTGAAGAGTCCATGCGTGCCGGCCGAG
TCTATCTGGAAGACACCCGGGAAGTCCTTAGCAAACGAGTGGTTCGTCTTTCTGAAAGTGTCGATGCCCTGTTTGGAAAC
ACCCGCGCCGATGACGCCCGTAACACCAGCACCTTGCGTGTTTCGCAGACCCTTTATGTTCGTGATGGAGACCTGGGGGC
AGAGGACCTTTCGACGTCTCTGAATCTTTATTTGCCGAACTTTCAGAAATGGGAAAAGAGCCTTCGCGACAAGTACTTCA
GCCGGAATAACACCGATGAAGGGGGCGAGGGTGAATCCGGTCAGGAGCCCGCCCAGCGTTATTGGGATCTGAACACCGAG
GCGGGGTTGGTGGTGACAATTCCGGTGAATTATTTTGCGAAGCTGCGCTTGCGCCGGAACTTCTTGATGGGAATTTTTGA
AAATTCATTTTATCAGGAATTTCGCTGGTCCAAAAAAGACGAGTGGGAGGAAACATCATCATTGACCACGGACTATGCCT
TCGATCGTGAATTGCTGTTTCGATTTATCAATGAAGCCAACTGGGCCATGACCAACGAACGATTTGGAACTCACCATGGT
CCGTCGTTGATTCAGACCTTCACAGCAGATTCGGCCCTGTCCTATGACTTCCGTTTTAACACCAAGATGGAAGGCTACTC
CCTTTACGGCGACAGCCTGGTGCTGTCGTCCACGTACACCCAACGAACCAGCATTGACTGGATTTATCTGAAAACCACGC
CGGAAATCGCCTGGGCCCGCAAAGATGACTTTGCCCCGGTCATGACGCTTTATCTGAAAGTGGATTTGATCTTTGGTAAT
GAGGGCAAAGACTAA

Upstream 100 bases:

>100_bases
AAATAATCATAATCGGCGCGTAATAGCGACCCATGGCGTTCCACGTTAAGTGGCTGATTCCAGTAATGACATTTGTGAAG
TGGCCCCCTAATCTGAATCT

Downstream 100 bases:

>100_bases
AGCTTGGATTCACTGATGCCCTTGCTTTTCAGCAGGGCGGGCCAGGAGCCATCGTTCATCACCATATCAATCAACCGGTT
CATTTCTCCGGTTGAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRVFSFLFCLFLISPGHAEETPNPSPQPISQENPMPVPAPQTGVVEESMRAGRVYLEDTREVLSKRVVRLSESVDALFGN
TRADDARNTSTLRVSQTLYVRDGDLGAEDLSTSLNLYLPNFQKWEKSLRDKYFSRNNTDEGGEGESGQEPAQRYWDLNTE
AGLVVTIPVNYFAKLRLRRNFLMGIFENSFYQEFRWSKKDEWEETSSLTTDYAFDRELLFRFINEANWAMTNERFGTHHG
PSLIQTFTADSALSYDFRFNTKMEGYSLYGDSLVLSSTYTQRTSIDWIYLKTTPEIAWARKDDFAPVMTLYLKVDLIFGN
EGKD

Sequences:

>Translated_324_residues
MRVFSFLFCLFLISPGHAEETPNPSPQPISQENPMPVPAPQTGVVEESMRAGRVYLEDTREVLSKRVVRLSESVDALFGN
TRADDARNTSTLRVSQTLYVRDGDLGAEDLSTSLNLYLPNFQKWEKSLRDKYFSRNNTDEGGEGESGQEPAQRYWDLNTE
AGLVVTIPVNYFAKLRLRRNFLMGIFENSFYQEFRWSKKDEWEETSSLTTDYAFDRELLFRFINEANWAMTNERFGTHHG
PSLIQTFTADSALSYDFRFNTKMEGYSLYGDSLVLSSTYTQRTSIDWIYLKTTPEIAWARKDDFAPVMTLYLKVDLIFGN
EGKD
>Mature_324_residues
MRVFSFLFCLFLISPGHAEETPNPSPQPISQENPMPVPAPQTGVVEESMRAGRVYLEDTREVLSKRVVRLSESVDALFGN
TRADDARNTSTLRVSQTLYVRDGDLGAEDLSTSLNLYLPNFQKWEKSLRDKYFSRNNTDEGGEGESGQEPAQRYWDLNTE
AGLVVTIPVNYFAKLRLRRNFLMGIFENSFYQEFRWSKKDEWEETSSLTTDYAFDRELLFRFINEANWAMTNERFGTHHG
PSLIQTFTADSALSYDFRFNTKMEGYSLYGDSLVLSSTYTQRTSIDWIYLKTTPEIAWARKDDFAPVMTLYLKVDLIFGN
EGKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37335; Mature: 37335

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFSFLFCLFLISPGHAEETPNPSPQPISQENPMPVPAPQTGVVEESMRAGRVYLEDTR
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEHHHHH
EVLSKRVVRLSESVDALFGNTRADDARNTSTLRVSQTLYVRDGDLGAEDLSTSLNLYLPN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHCCCEEEECCC
FQKWEKSLRDKYFSRNNTDEGGEGESGQEPAQRYWDLNTEAGLVVTIPVNYFAKLRLRRN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH
FLMGIFENSFYQEFRWSKKDEWEETSSLTTDYAFDRELLFRFINEANWAMTNERFGTHHG
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
PSLIQTFTADSALSYDFRFNTKMEGYSLYGDSLVLSSTYTQRTSIDWIYLKTTPEIAWAR
CHHHHHHCCCCEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCCEEEEEECCCEEECC
KDDFAPVMTLYLKVDLIFGNEGKD
CCCCHHHEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MRVFSFLFCLFLISPGHAEETPNPSPQPISQENPMPVPAPQTGVVEESMRAGRVYLEDTR
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEHHHHH
EVLSKRVVRLSESVDALFGNTRADDARNTSTLRVSQTLYVRDGDLGAEDLSTSLNLYLPN
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHCCCEEEECCC
FQKWEKSLRDKYFSRNNTDEGGEGESGQEPAQRYWDLNTEAGLVVTIPVNYFAKLRLRRN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH
FLMGIFENSFYQEFRWSKKDEWEETSSLTTDYAFDRELLFRFINEANWAMTNERFGTHHG
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCC
PSLIQTFTADSALSYDFRFNTKMEGYSLYGDSLVLSSTYTQRTSIDWIYLKTTPEIAWAR
CHHHHHHCCCCEEEEEEEECCCCCCEEEECCEEEEECCCCCCCCCCEEEEEECCCEEECC
KDDFAPVMTLYLKVDLIFGNEGKD
CCCCHHHEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA