| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521868
Identifier: 42521868
GI number: 42521868
Start: 230352
End: 230708
Strand: Direct
Name: 42521868
Synonym: Bd0243
Alternate gene names: NA
Gene position: 230352-230708 (Clockwise)
Preceding gene: 42521867
Following gene: 42521872
Centisome position: 6.09
GC content: 49.3
Gene sequence:
>357_bases ATGAAATTCCTAACTATGTTTTCTGTATTGATTCTTGGCGGCGCAGCGCAGGCGATGACGGCAAAGGTTGTGAATTCAAC GGATGTGCGTTTTATGGCGGACTTGATTTTGACTCGTGCAAGTGGCGGAGCCCCACTGAGTGTTGTGGATGACAAGATCC TTGCGCCGGGAGAAGCCTTCGAGAAAAACTACGGAGTGTTGGACGCCAATGAGCTTGTCCTAAGATACGAAATCATCTCC ACCGACAATAAACCCATCTGTTTGGGCAAGGTGGATGTGACTTCTAAAAGCAACTTCAAGCTTGTCGTCGACGGCCACCC TGGGATGGCTCCTGTGGATTGCAAAGTCACCCAATAA
Upstream 100 bases:
>100_bases CCTCGCCCCCTGCCATTTTTGTGAAGCAAAAATCCTTTAATCTCCAATTTCCAATATCTCTGCCGGGTCGCCAGTGTTAA AAATGTAAATGGGGGTACTG
Downstream 100 bases:
>100_bases GGGTGTCGCAACAACAGAAGACCCGCAGAACTTTTATTGTGCTACGAACTCAATGGGCTGCGGGTTCCAAATAACTTTTC CTTCGGAATCCAGGTCATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ
Sequences:
>Translated_118_residues MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ >Mature_118_residues MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAFEKNYGVLDANELVLRYEIIS TDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12604; Mature: 12604
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAF CHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCEECCCCHH EKNYGVLDANELVLRYEIISTDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ HCCCCEECCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECC >Mature Secondary Structure MKFLTMFSVLILGGAAQAMTAKVVNSTDVRFMADLILTRASGGAPLSVVDDKILAPGEAF CHHHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCEECCCCHH EKNYGVLDANELVLRYEIISTDNKPICLGKVDVTSKSNFKLVVDGHPGMAPVDCKVTQ HCCCCEECCCCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA