Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521839

Identifier: 42521839

GI number: 42521839

Start: 199974

End: 201020

Strand: Direct

Name: 42521839

Synonym: Bd0210

Alternate gene names: NA

Gene position: 199974-201020 (Clockwise)

Preceding gene: 42521837

Following gene: 42521840

Centisome position: 5.29

GC content: 54.54

Gene sequence:

>1047_bases
ATGTGGAGGTATAGCATGCGCATTCATCTGCAACTTGCCCTGTCTGTTTTGGCTCTGTCTGTGGCAGCCTGCTCCAATGG
CGGAGGAGGCGGCGGCGGTGCGGCCCCGGTCCCAGCCACAACAACGACGACCACTCCCACGCCGGTCGATGTTCAGGGTG
AATTCACCTACGAATATAAATTCAATGGCTGCACGACAGGCCGTCAGAAGCTGACTTCTAAAAATGCTTATTGCGATGCT
TTGTTGAACGATGCTTTGAATAACAATTGTGCCCGCGAAATGCGCGTGGAAACTTACAACCGCATGTGCACCACCAACAC
TCAAGTCAGCAGCCCGGGAACTTTGCCGGCGATGAGCACCGCTCGTTGCGTGGTGAATGGGATGGATTTGAAGGATCGTA
CGTTCCTGCAGAACATGAATCCGTTCAATCCGCAAAGACGTCAGATTTATCGCGATATGTTCTGGAGCGGGAAGAACGAT
CAGGGCTACGACATTCTGGGGAGTCTGGTTGATTCTTACGGGAAGGGTCGTCTGTTGTTGACGCCAGCTCAGGCGGGCCG
CTCCGCTTTGGGTGAAATCCAGCTGCACCAGCAGCGCGGGGACAGCAAGTTTTCCGTGCGTTCGGGCCTGGGCTCACAGA
TCAGCCTGAAGGTCACCAATCTGGAAATTCAAAAAGAAGTGGAAGCGGTTTGTCTGTCGGACAAGTCTTTCAAGCGCACC
AAAGCTGATTTGCGCCGTGTGAAGTGCTCCCTGACTCACTCTGAGTCCGGCCGAAAGGAAACCCGCCGTGATGAAGAGAT
CGTGTGGGATGTCGCCAATAAGGTGGAGCGTGAGATCTTCCGCGGTCGTTCAACGGAAAGAATCACCCTGCGTCTGAAAC
CCGCTGCTGGCGGGCAAGACGAGCGCATTGCCGTTGAGGCGGTGGATCTGGATATCGACAAAACCATGGTGGCTGAAACA
ACCTTGAATGAAGGTTTGGAGGTCCGCTTCCGTGGTCAGTTGACGGGCACCGACCTTACGATCCAGTGTGCACCTGCGTC
AAAATAA

Upstream 100 bases:

>100_bases
GTCACACCTGTCAGGGAGTTGATCAGAATGAATCTCCGGGCGCCTAACAGTTGCATTACGGCGTTGGCAGGGTCTTTGAA
GTAAAGGCGGTGTTGACCGT

Downstream 100 bases:

>100_bases
ACTCAAAAAAGGCCTAAATATCAGTATTGACTCCGGTTTTTATAGAACCTAGACTTGAACTGTTTAAAGCCCGATGAATA
TTACACTGAAGTGAGATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MWRYSMRIHLQLALSVLALSVAACSNGGGGGGGAAPVPATTTTTTPTPVDVQGEFTYEYKFNGCTTGRQKLTSKNAYCDA
LLNDALNNNCAREMRVETYNRMCTTNTQVSSPGTLPAMSTARCVVNGMDLKDRTFLQNMNPFNPQRRQIYRDMFWSGKND
QGYDILGSLVDSYGKGRLLLTPAQAGRSALGEIQLHQQRGDSKFSVRSGLGSQISLKVTNLEIQKEVEAVCLSDKSFKRT
KADLRRVKCSLTHSESGRKETRRDEEIVWDVANKVEREIFRGRSTERITLRLKPAAGGQDERIAVEAVDLDIDKTMVAET
TLNEGLEVRFRGQLTGTDLTIQCAPASK

Sequences:

>Translated_348_residues
MWRYSMRIHLQLALSVLALSVAACSNGGGGGGGAAPVPATTTTTTPTPVDVQGEFTYEYKFNGCTTGRQKLTSKNAYCDA
LLNDALNNNCAREMRVETYNRMCTTNTQVSSPGTLPAMSTARCVVNGMDLKDRTFLQNMNPFNPQRRQIYRDMFWSGKND
QGYDILGSLVDSYGKGRLLLTPAQAGRSALGEIQLHQQRGDSKFSVRSGLGSQISLKVTNLEIQKEVEAVCLSDKSFKRT
KADLRRVKCSLTHSESGRKETRRDEEIVWDVANKVEREIFRGRSTERITLRLKPAAGGQDERIAVEAVDLDIDKTMVAET
TLNEGLEVRFRGQLTGTDLTIQCAPASK
>Mature_348_residues
MWRYSMRIHLQLALSVLALSVAACSNGGGGGGGAAPVPATTTTTTPTPVDVQGEFTYEYKFNGCTTGRQKLTSKNAYCDA
LLNDALNNNCAREMRVETYNRMCTTNTQVSSPGTLPAMSTARCVVNGMDLKDRTFLQNMNPFNPQRRQIYRDMFWSGKND
QGYDILGSLVDSYGKGRLLLTPAQAGRSALGEIQLHQQRGDSKFSVRSGLGSQISLKVTNLEIQKEVEAVCLSDKSFKRT
KADLRRVKCSLTHSESGRKETRRDEEIVWDVANKVEREIFRGRSTERITLRLKPAAGGQDERIAVEAVDLDIDKTMVAET
TLNEGLEVRFRGQLTGTDLTIQCAPASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38406; Mature: 38406

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRYSMRIHLQLALSVLALSVAACSNGGGGGGGAAPVPATTTTTTPTPVDVQGEFTYEYK
CCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEE
FNGCTTGRQKLTSKNAYCDALLNDALNNNCAREMRVETYNRMCTTNTQVSSPGTLPAMST
ECCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCH
ARCVVNGMDLKDRTFLQNMNPFNPQRRQIYRDMFWSGKNDQGYDILGSLVDSYGKGRLLL
HHHEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEE
TPAQAGRSALGEIQLHQQRGDSKFSVRSGLGSQISLKVTNLEIQKEVEAVCLSDKSFKRT
EECHHCCHHHHHEEEEHHCCCCCEEHHCCCCCEEEEEEECEEHHHHHHHHHCCCCHHHHH
KADLRRVKCSLTHSESGRKETRRDEEIVWDVANKVEREIFRGRSTERITLRLKPAAGGQD
HHHHHHHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
ERIAVEAVDLDIDKTMVAETTLNEGLEVRFRGQLTGTDLTIQCAPASK
CEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCC
>Mature Secondary Structure
MWRYSMRIHLQLALSVLALSVAACSNGGGGGGGAAPVPATTTTTTPTPVDVQGEFTYEYK
CCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEE
FNGCTTGRQKLTSKNAYCDALLNDALNNNCAREMRVETYNRMCTTNTQVSSPGTLPAMST
ECCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCH
ARCVVNGMDLKDRTFLQNMNPFNPQRRQIYRDMFWSGKNDQGYDILGSLVDSYGKGRLLL
HHHEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEE
TPAQAGRSALGEIQLHQQRGDSKFSVRSGLGSQISLKVTNLEIQKEVEAVCLSDKSFKRT
EECHHCCHHHHHEEEEHHCCCCCEEHHCCCCCEEEEEEECEEHHHHHHHHHCCCCHHHHH
KADLRRVKCSLTHSESGRKETRRDEEIVWDVANKVEREIFRGRSTERITLRLKPAAGGQD
HHHHHHHHEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCC
ERIAVEAVDLDIDKTMVAETTLNEGLEVRFRGQLTGTDLTIQCAPASK
CEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA