| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521735
Identifier: 42521735
GI number: 42521735
Start: 85438
End: 85905
Strand: Direct
Name: 42521735
Synonym: Bd0090
Alternate gene names: NA
Gene position: 85438-85905 (Clockwise)
Preceding gene: 42521734
Following gene: 42521737
Centisome position: 2.26
GC content: 48.72
Gene sequence:
>468_bases ATGAAAAAGATCCTAATCGGTTTGCTGTCTTTCGTCGCATTGTCTTCTGCTTCAGCCAAAAGCACTTCGGGTACTGGCCA GATCGGCTCTGGCACTGTCAGTCTGACAGAAAAAGATTTTGCAGGCAGCTATATCGTGGGTCGCCTGGCTATTGAGGGCC CCTATTATGTGGTTCAGTTTGAAGTCAGCAAAAAAGGTGATGTGGTGGTGTTCAGACAAGCCAACATGGACCAGGTTTCT GAAAACAACGACTGTATCGGTGACGGCTTTAAAATCGACGGCGACATCCTGAATGTGGGTGTGGCTTGTAAAAGCCTGGG CGGCGCGGTTTTGAATTTTGAAATCAACGTGGCTGGTCTGACCAAGGCAGACCTTGAAAAAGGCGCTTCCGTGATGGTGC GCAGTGAAGCCACCGAAGGTGCCTGGATCCCGTTTGAGATCACAAAACGTAAAAAGTCATTCTTCTAA
Upstream 100 bases:
>100_bases TTCAATGGCACATCCGTTGCTTTCTACCCTTTGCAAATAAATCAACTCAAGGCCTCCGCTTCGGCGTGCTCTAAGAGTCC ATATCTGTAAGAGGTGTATT
Downstream 100 bases:
>100_bases GAAGTTTGAAGGTGAAGGCGTAACTCTGTGCTTGTCAAAAACGATGGGTGCAGAGGGATGCTTAAAGAATGCGCAAAAAG TGGCGGAGAGGGAGGGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKKILIGLLSFVALSSASAKSTSGTGQIGSGTVSLTEKDFAGSYIVGRLAIEGPYYVVQFEVSKKGDVVVFRQANMDQVS ENNDCIGDGFKIDGDILNVGVACKSLGGAVLNFEINVAGLTKADLEKGASVMVRSEATEGAWIPFEITKRKKSFF
Sequences:
>Translated_155_residues MKKILIGLLSFVALSSASAKSTSGTGQIGSGTVSLTEKDFAGSYIVGRLAIEGPYYVVQFEVSKKGDVVVFRQANMDQVS ENNDCIGDGFKIDGDILNVGVACKSLGGAVLNFEINVAGLTKADLEKGASVMVRSEATEGAWIPFEITKRKKSFF >Mature_155_residues MKKILIGLLSFVALSSASAKSTSGTGQIGSGTVSLTEKDFAGSYIVGRLAIEGPYYVVQFEVSKKGDVVVFRQANMDQVS ENNDCIGDGFKIDGDILNVGVACKSLGGAVLNFEINVAGLTKADLEKGASVMVRSEATEGAWIPFEITKRKKSFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16424; Mature: 16424
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILIGLLSFVALSSASAKSTSGTGQIGSGTVSLTEKDFAGSYIVGRLAIEGPYYVVQF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEE EVSKKGDVVVFRQANMDQVSENNDCIGDGFKIDGDILNVGVACKSLGGAVLNFEINVAGL EECCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCEEEECHHHHCCCCEEEEEEEEEECC TKADLEKGASVMVRSEATEGAWIPFEITKRKKSFF CHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MKKILIGLLSFVALSSASAKSTSGTGQIGSGTVSLTEKDFAGSYIVGRLAIEGPYYVVQF CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEE EVSKKGDVVVFRQANMDQVSENNDCIGDGFKIDGDILNVGVACKSLGGAVLNFEINVAGL EECCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCEEEECHHHHCCCCEEEEEEEEEECC TKADLEKGASVMVRSEATEGAWIPFEITKRKKSFF CHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA