Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521731

Identifier: 42521731

GI number: 42521731

Start: 80969

End: 83047

Strand: Direct

Name: 42521731

Synonym: Bd0086

Alternate gene names: NA

Gene position: 80969-83047 (Clockwise)

Preceding gene: 42521730

Following gene: 42521732

Centisome position: 2.14

GC content: 51.08

Gene sequence:

>2079_bases
TTGGGACTGCAGTCCCATTCACAAGTCAGAGAGAATAAAGGAATGAAAGCACTTTCATTCCTTTTTCTTTTTTTGAGCGT
TGTTGTCTCTTTGTCCTGCCAGCACAAGGAAAAACAAATCCCCCGCGATATCGCTTCTCTTCAAGCCAATGGCGGCATGG
AAGGTATTTGGTTCTTGCAAGGAACTTCCTCCACCCGCGGGCCTTATAATGGTGAGCTGGAACTGCGCAAGGCATCCGAT
GGAACTTTTGATGTGGTTCGCGTGGTCACCTACATCAACTACTTCTTTGATGGCTTGAAAGTGCAGGAAGTATGGACCGG
AAAGGCCGTGGCCACGCATGATTCCCTGACGATTTCCTATGACCTTCGCCAGGGTGATTTCATCACAAAGCTTGGCAATC
AAAAGCGAGATCCGTCGGACTTCGATGCTCCGATCACGGTGCTTTCCCGCTATGTGGTGACTCCGAATGGCCTTGCGACT
CACTATGCAGATAAAAAAGTTTCTAACTACAACGAATGGATCACCACCCGTCGTGATCTTGAAGCGCAACCGTTGTGGGT
GAATCAGCGCCAGACCATCAGTGCCCAGGGACCGAAAGTTCCTCTGGTGGTTCGTGGCGTGATCAATCTTTTCAAAAAAG
ACATTGGTTACGAAAAAGATCCTTTGGTGAAGTCCTACAAAAACCGCCCCGAGTATAAAAACGAAAATCCGTACATCGTT
TTTGATCCCACGGACTTCCAGTTCTATCGCAACAACAAGGATGTGATTCGTGTCACCAACAAGATCGTCGATGACATCAG
CATCACCGAAGCGGCGGTGAAACGAAATGCCTATGCTCCGACGTTAGAGGAAAAAGCCAACAGCTATGACAAAAACACCC
GTGACTTCCATATCAATGAAGCCGGCATGGTTGCGCACGCCGTGCTGGACGAAAACGGAAGACTGTTGAACTATTCCTTT
GATGGGGATGCCGCCCTGTGGACGGGAATGTATCTGGGCTCTCAGGCGATGCGCTATCTGAAAACCAAGGACAGCGAAGC
TTTGGACAACGTGAAAAAGTCCCTGCGCGGTCTGATGACTTTGATGGAGATCACCAATGATCCGCAGCAATTCGCACGCA
CGTTGGCGCTGTACAATCCCGCCCAGCCGGTTCCGGCCAAGTGGCATCGCGGTGAAGGCAAGTTCCAGCACCTGATCTGG
CTTGAAGGCGGCAACAACGACATGATCAAAGGGATCACTCACGGCTTCTTGTGGGCCGGAATGGTGCTGCCACAAAGTGA
AACCGAACTTTGGAAAGAGCTTCGTGCCAATTCCCGCAAGCTGATTGATCTGCAGGTTGTGAACGACAAATCCCAGAACC
GTCCGGCGGCGTTGGGACTGGCAGCCTGGCTGACAAATGATGCCTCTTTCAAAGAGCAGTACATCAAGTACTATGACAAG
ATTAAAACCAAGGTGACTGGTTACAGCTTCGACACCACTTTCTACTGGCATGGCTCTGCGGACTGGAGTGGGATCAATTT
GGGGTTGGTGGGTGATATCACCGACATCACGCTGGCAGACCTGCTGGGTCAAAGTAAGATCCGCGATCAGTTGCGCGAAC
GCCTGATGGATGCCTGGGTGACGTATTCACCGGCGCAACGACATCTGCAGACGCTGGTGGCTTACGGCTTTGCTTATAAA
CACGGAACCCGTGGTGGGAACTTCCGCTCCGAAAGCAGCGAGGCGCAGTTTAATGCTTCGTTGAACCAGGCCGCTTGGGG
TCTTCGTGAAATCCCGTATCCGCGCCCGAATCTGGATGTGACGATCGATCATTCATTGCGCCCGGATTGGTGCATGTCTC
CGATTCCAAGGTTGTTCTGGAAGTCCCTGAAAAAGCCGGAACCACCGGTCAGCTATTTCTATCAGGGTTTGTATAACTAC
CCTGTATTTGAGCTGCAGGCCTTCACCAGTAACTTTGTCTGGAAAGACGGGGCCTTCCTGTATCAGGATTCTCACCGAAA
AGGTGTGGAAAACTCAGGGGTGGATTACCTGTATGGCTATTGGCTGGCTCGTTACATTGGCGCCACCAATATCAACTAG

Upstream 100 bases:

>100_bases
GTACCCATGGTTCAATGCGCTCACACAGAGGCATTGGAAGTTTTCAAAGAGTGGGACAGTAAGACCGACAAGGTTCCGTA
CTAAAGCCCAGTAAATAGTT

Downstream 100 bases:

>100_bases
GCGCCTGTAAAAGATACCGTTGCTAATCATGGGGATATCTCTTAAAAAGGTCCCCATGAAAAAGAAAAACGGCCGTGATT
CCAAAGAGCTTGCTGATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 691

Protein sequence:

>692_residues
MGLQSHSQVRENKGMKALSFLFLFLSVVVSLSCQHKEKQIPRDIASLQANGGMEGIWFLQGTSSTRGPYNGELELRKASD
GTFDVVRVVTYINYFFDGLKVQEVWTGKAVATHDSLTISYDLRQGDFITKLGNQKRDPSDFDAPITVLSRYVVTPNGLAT
HYADKKVSNYNEWITTRRDLEAQPLWVNQRQTISAQGPKVPLVVRGVINLFKKDIGYEKDPLVKSYKNRPEYKNENPYIV
FDPTDFQFYRNNKDVIRVTNKIVDDISITEAAVKRNAYAPTLEEKANSYDKNTRDFHINEAGMVAHAVLDENGRLLNYSF
DGDAALWTGMYLGSQAMRYLKTKDSEALDNVKKSLRGLMTLMEITNDPQQFARTLALYNPAQPVPAKWHRGEGKFQHLIW
LEGGNNDMIKGITHGFLWAGMVLPQSETELWKELRANSRKLIDLQVVNDKSQNRPAALGLAAWLTNDASFKEQYIKYYDK
IKTKVTGYSFDTTFYWHGSADWSGINLGLVGDITDITLADLLGQSKIRDQLRERLMDAWVTYSPAQRHLQTLVAYGFAYK
HGTRGGNFRSESSEAQFNASLNQAAWGLREIPYPRPNLDVTIDHSLRPDWCMSPIPRLFWKSLKKPEPPVSYFYQGLYNY
PVFELQAFTSNFVWKDGAFLYQDSHRKGVENSGVDYLYGYWLARYIGATNIN

Sequences:

>Translated_692_residues
MGLQSHSQVRENKGMKALSFLFLFLSVVVSLSCQHKEKQIPRDIASLQANGGMEGIWFLQGTSSTRGPYNGELELRKASD
GTFDVVRVVTYINYFFDGLKVQEVWTGKAVATHDSLTISYDLRQGDFITKLGNQKRDPSDFDAPITVLSRYVVTPNGLAT
HYADKKVSNYNEWITTRRDLEAQPLWVNQRQTISAQGPKVPLVVRGVINLFKKDIGYEKDPLVKSYKNRPEYKNENPYIV
FDPTDFQFYRNNKDVIRVTNKIVDDISITEAAVKRNAYAPTLEEKANSYDKNTRDFHINEAGMVAHAVLDENGRLLNYSF
DGDAALWTGMYLGSQAMRYLKTKDSEALDNVKKSLRGLMTLMEITNDPQQFARTLALYNPAQPVPAKWHRGEGKFQHLIW
LEGGNNDMIKGITHGFLWAGMVLPQSETELWKELRANSRKLIDLQVVNDKSQNRPAALGLAAWLTNDASFKEQYIKYYDK
IKTKVTGYSFDTTFYWHGSADWSGINLGLVGDITDITLADLLGQSKIRDQLRERLMDAWVTYSPAQRHLQTLVAYGFAYK
HGTRGGNFRSESSEAQFNASLNQAAWGLREIPYPRPNLDVTIDHSLRPDWCMSPIPRLFWKSLKKPEPPVSYFYQGLYNY
PVFELQAFTSNFVWKDGAFLYQDSHRKGVENSGVDYLYGYWLARYIGATNIN
>Mature_691_residues
GLQSHSQVRENKGMKALSFLFLFLSVVVSLSCQHKEKQIPRDIASLQANGGMEGIWFLQGTSSTRGPYNGELELRKASDG
TFDVVRVVTYINYFFDGLKVQEVWTGKAVATHDSLTISYDLRQGDFITKLGNQKRDPSDFDAPITVLSRYVVTPNGLATH
YADKKVSNYNEWITTRRDLEAQPLWVNQRQTISAQGPKVPLVVRGVINLFKKDIGYEKDPLVKSYKNRPEYKNENPYIVF
DPTDFQFYRNNKDVIRVTNKIVDDISITEAAVKRNAYAPTLEEKANSYDKNTRDFHINEAGMVAHAVLDENGRLLNYSFD
GDAALWTGMYLGSQAMRYLKTKDSEALDNVKKSLRGLMTLMEITNDPQQFARTLALYNPAQPVPAKWHRGEGKFQHLIWL
EGGNNDMIKGITHGFLWAGMVLPQSETELWKELRANSRKLIDLQVVNDKSQNRPAALGLAAWLTNDASFKEQYIKYYDKI
KTKVTGYSFDTTFYWHGSADWSGINLGLVGDITDITLADLLGQSKIRDQLRERLMDAWVTYSPAQRHLQTLVAYGFAYKH
GTRGGNFRSESSEAQFNASLNQAAWGLREIPYPRPNLDVTIDHSLRPDWCMSPIPRLFWKSLKKPEPPVSYFYQGLYNYP
VFELQAFTSNFVWKDGAFLYQDSHRKGVENSGVDYLYGYWLARYIGATNIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78971; Mature: 78840

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLQSHSQVRENKGMKALSFLFLFLSVVVSLSCQHKEKQIPRDIASLQANGGMEGIWFLQ
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCCCCEEEEEE
GTSSTRGPYNGELELRKASDGTFDVVRVVTYINYFFDGLKVQEVWTGKAVATHDSLTISY
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEE
DLRQGDFITKLGNQKRDPSDFDAPITVLSRYVVTPNGLATHYADKKVSNYNEWITTRRDL
ECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHCCC
EAQPLWVNQRQTISAQGPKVPLVVRGVINLFKKDIGYEKDPLVKSYKNRPEYKNENPYIV
CCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEE
FDPTDFQFYRNNKDVIRVTNKIVDDISITEAAVKRNAYAPTLEEKANSYDKNTRDFHINE
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEECC
AGMVAHAVLDENGRLLNYSFDGDAALWTGMYLGSQAMRYLKTKDSEALDNVKKSLRGLMT
CCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LMEITNDPQQFARTLALYNPAQPVPAKWHRGEGKFQHLIWLEGGNNDMIKGITHGFLWAG
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
MVLPQSETELWKELRANSRKLIDLQVVNDKSQNRPAALGLAAWLTNDASFKEQYIKYYDK
EECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IKTKVTGYSFDTTFYWHGSADWSGINLGLVGDITDITLADLLGQSKIRDQLRERLMDAWV
HHHEECCEEECEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
TYSPAQRHLQTLVAYGFAYKHGTRGGNFRSESSEAQFNASLNQAAWGLREIPYPRPNLDV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCHHHCCCCCCCCEE
TIDHSLRPDWCMSPIPRLFWKSLKKPEPPVSYFYQGLYNYPVFELQAFTSNFVWKDGAFL
EECCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEHHHCCCEECCCCEE
YQDSHRKGVENSGVDYLYGYWLARYIGATNIN
EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GLQSHSQVRENKGMKALSFLFLFLSVVVSLSCQHKEKQIPRDIASLQANGGMEGIWFLQ
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCCCCEEEEEE
GTSSTRGPYNGELELRKASDGTFDVVRVVTYINYFFDGLKVQEVWTGKAVATHDSLTISY
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEE
DLRQGDFITKLGNQKRDPSDFDAPITVLSRYVVTPNGLATHYADKKVSNYNEWITTRRDL
ECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCHHHHHHHHCCC
EAQPLWVNQRQTISAQGPKVPLVVRGVINLFKKDIGYEKDPLVKSYKNRPEYKNENPYIV
CCCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEE
FDPTDFQFYRNNKDVIRVTNKIVDDISITEAAVKRNAYAPTLEEKANSYDKNTRDFHINE
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEECC
AGMVAHAVLDENGRLLNYSFDGDAALWTGMYLGSQAMRYLKTKDSEALDNVKKSLRGLMT
CCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LMEITNDPQQFARTLALYNPAQPVPAKWHRGEGKFQHLIWLEGGNNDMIKGITHGFLWAG
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHC
MVLPQSETELWKELRANSRKLIDLQVVNDKSQNRPAALGLAAWLTNDASFKEQYIKYYDK
EECCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IKTKVTGYSFDTTFYWHGSADWSGINLGLVGDITDITLADLLGQSKIRDQLRERLMDAWV
HHHEECCEEECEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
TYSPAQRHLQTLVAYGFAYKHGTRGGNFRSESSEAQFNASLNQAAWGLREIPYPRPNLDV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHCCHHHCCCCCCCCEE
TIDHSLRPDWCMSPIPRLFWKSLKKPEPPVSYFYQGLYNYPVFELQAFTSNFVWKDGAFL
EECCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEHHHCCCEECCCCEE
YQDSHRKGVENSGVDYLYGYWLARYIGATNIN
EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA