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The map label for this gene is sdhC

Identifier: 42521672

GI number: 42521672

Start: 21751

End: 22410

Strand: Direct

Name: sdhC

Synonym: Bd0024

Alternate gene names: NA

Gene position: 21751-22410 (Clockwise)

Preceding gene: 42521663

Following gene: 42521673

Centisome position: 0.57

GC content: 50.0

Gene sequence:

>660_bases
ATGTCTGGATTTCTCGGATCTACGGTCGGGAAAAAGTACCTAATGGGAATCACCGGTTTAGTCTGGGCGGGATTTGTTCT
CGCACACATGGCCGGCAATCTACTCATCTTTGTCAGTAACGATGCCTACAATGCTTACGGACACGCACTGACAAGCGGAA
ACATCATCTACGTCGCGGAAGCCGTTCTGGTTCTGGCGTTGATCGTGCACGTTTTCTGCGCCCTCAGCCTCACGAAGAAC
AATCGTGAAGCCAAACAACAGCGTTATGCTGTTGCTGCGGGTGGAAAGAAGAAAGTCACTCTGGCCTCTCGTACCATGGC
GGTTCAGGGCAGTTTGATTCTGGTCTTCATCATCCTTCACCTGATCACTTTCAAATACGGCACGCACTATGAAACCACCG
TCAATGGTGTGGTGATGCGTGACTTGGCGAAACTGATGTTTGAAGTCTTCCAGAGTCCGGCTTACATCGCATGGTATGTG
GTGTGTCTGGTTCTTCTGGGCTTCCATCTAAGTCACGGTGTCGGCTCCACATTCCAGTCTTTGGGTCTGATGGAAGGCAC
ATACAGAAACACGTGGAAAAAACTCAGCTACGGTTATGCCGTGGTTGTGGCTGCGGGTTTCATCGCTCAACCTGTTTACA
TTTTCCTTGTCGGTAACTAA

Upstream 100 bases:

>100_bases
CGAAACATGACGGGGGACATGGACAAAAAGCTGCACCCGGGAGTAAAGTAACTGGAAACTTATTGAGAAAATACACACCA
AAAACAAGGGGTTCTACACC

Downstream 100 bases:

>100_bases
GGGGACAACACATGGCTCACAATTTAGACAGCAAAATTCCAAGTGGCCCGATTGAATCCAAATGGACCAAAACCAAGTTC
GACTACAAGCTGGTGAACCC

Product: putative cytochrome B subunit

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Fumarate Reductase Transmembrane Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome; Succinate Dehydrogenase Subunit; Fumarate Reductase Cytochrome B Subunit; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase Cytochrome B Subunit SdhC; Succinate Dehydrogenase Subunit C/Fumarate Reductase

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSGFLGSTVGKKYLMGITGLVWAGFVLAHMAGNLLIFVSNDAYNAYGHALTSGNIIYVAEAVLVLALIVHVFCALSLTKN
NREAKQQRYAVAAGGKKKVTLASRTMAVQGSLILVFIILHLITFKYGTHYETTVNGVVMRDLAKLMFEVFQSPAYIAWYV
VCLVLLGFHLSHGVGSTFQSLGLMEGTYRNTWKKLSYGYAVVVAAGFIAQPVYIFLVGN

Sequences:

>Translated_219_residues
MSGFLGSTVGKKYLMGITGLVWAGFVLAHMAGNLLIFVSNDAYNAYGHALTSGNIIYVAEAVLVLALIVHVFCALSLTKN
NREAKQQRYAVAAGGKKKVTLASRTMAVQGSLILVFIILHLITFKYGTHYETTVNGVVMRDLAKLMFEVFQSPAYIAWYV
VCLVLLGFHLSHGVGSTFQSLGLMEGTYRNTWKKLSYGYAVVVAAGFIAQPVYIFLVGN
>Mature_218_residues
SGFLGSTVGKKYLMGITGLVWAGFVLAHMAGNLLIFVSNDAYNAYGHALTSGNIIYVAEAVLVLALIVHVFCALSLTKNN
REAKQQRYAVAAGGKKKVTLASRTMAVQGSLILVFIILHLITFKYGTHYETTVNGVVMRDLAKLMFEVFQSPAYIAWYVV
CLVLLGFHLSHGVGSTFQSLGLMEGTYRNTWKKLSYGYAVVVAAGFIAQPVYIFLVGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 23845; Mature: 23714

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFLGSTVGKKYLMGITGLVWAGFVLAHMAGNLLIFVSNDAYNAYGHALTSGNIIYVAE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHEECCCCEEHHHH
AVLVLALIVHVFCALSLTKNNREAKQQRYAVAAGGKKKVTLASRTMAVQGSLILVFIILH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHH
LITFKYGTHYETTVNGVVMRDLAKLMFEVFQSPAYIAWYVVCLVLLGFHLSHGVGSTFQS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
LGLMEGTYRNTWKKLSYGYAVVVAAGFIAQPVYIFLVGN
HCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure 
SGFLGSTVGKKYLMGITGLVWAGFVLAHMAGNLLIFVSNDAYNAYGHALTSGNIIYVAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHEECCCCEEHHHH
AVLVLALIVHVFCALSLTKNNREAKQQRYAVAAGGKKKVTLASRTMAVQGSLILVFIILH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHCCHHHHHHHHHH
LITFKYGTHYETTVNGVVMRDLAKLMFEVFQSPAYIAWYVVCLVLLGFHLSHGVGSTFQS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
LGLMEGTYRNTWKKLSYGYAVVVAAGFIAQPVYIFLVGN
HCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA