| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521658
Identifier: 42521658
GI number: 42521658
Start: 9925
End: 10281
Strand: Direct
Name: 42521658
Synonym: Bd0008
Alternate gene names: NA
Gene position: 9925-10281 (Clockwise)
Preceding gene: 42521657
Following gene: 42521659
Centisome position: 0.26
GC content: 44.54
Gene sequence:
>357_bases ATGAAATATGTACTCGCCATTCAAGCCCTCACCACCCTCCTTGGAGGCGTCCTTTTAGGGTTTTTTGCCGCACCACAACA CACCTACTCCTTCATTTCAGGGGCTTTGGTCATTTTGGTGAGCTTTTTCCTGATGGGATGGGCCTGGGGATTGATCTTCA GTAAGAAATTGGTTGCCCTAGCCATCGGGATCATTGTATTTAAGTACGCGATTTTAGGGATTATTATCTTTAAGCTTGTA GACCAAACTTGGTTCGACACTTTGTGGTTCGCACTAGGGGTCGCAAGTTTTATTCTTTCAGCGCTGGGATATGCGGTGAA AGAAGCCTTAAGAGAAGGAAAAGAAGATGTCATTTAA
Upstream 100 bases:
>100_bases CCTCTTTGGCTGGCTGGCTGGTCAGGGTTATCTGGTTGCTGAATCGAATTCAGAAACAAGATGAGAAAGAATCAGAATCC AAGAAACCACCCGGGACGCC
Downstream 100 bases:
>100_bases CTGGACACAATTGGTTCCGGGTGTTGGTCACGAGTACGCACACGTTGCGACTCTGGGTATTGCCACTGTAGCAGCAGTAG GTATCGGTGCAGCTGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKYVLAIQALTTLLGGVLLGFFAAPQHTYSFISGALVILVSFFLMGWAWGLIFSKKLVALAIGIIVFKYAILGIIIFKLV DQTWFDTLWFALGVASFILSALGYAVKEALREGKEDVI
Sequences:
>Translated_118_residues MKYVLAIQALTTLLGGVLLGFFAAPQHTYSFISGALVILVSFFLMGWAWGLIFSKKLVALAIGIIVFKYAILGIIIFKLV DQTWFDTLWFALGVASFILSALGYAVKEALREGKEDVI >Mature_118_residues MKYVLAIQALTTLLGGVLLGFFAAPQHTYSFISGALVILVSFFLMGWAWGLIFSKKLVALAIGIIVFKYAILGIIIFKLV DQTWFDTLWFALGVASFILSALGYAVKEALREGKEDVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12965; Mature: 12965
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVLAIQALTTLLGGVLLGFFAAPQHTYSFISGALVILVSFFLMGWAWGLIFSKKLVAL CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGIIVFKYAILGIIIFKLVDQTWFDTLWFALGVASFILSALGYAVKEALREGKEDVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKYVLAIQALTTLLGGVLLGFFAAPQHTYSFISGALVILVSFFLMGWAWGLIFSKKLVAL CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGIIVFKYAILGIIIFKLVDQTWFDTLWFALGVASFILSALGYAVKEALREGKEDVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA