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The map label for this gene is gidB

Identifier: 41410443

GI number: 41410443

Start: 4825803

End: 4826549

Strand: Reverse

Name: gidB

Synonym: MAP4345c

Alternate gene names: 41410443

Gene position: 4826549-4825803 (Counterclockwise)

Preceding gene: 41410444

Following gene: 41410442

Centisome position: 99.93

GC content: 69.34

Gene sequence:

>747_bases
ATGTTTCACGTGAAACATGTCGGTCCGGTCGAGCCGGCTGCGGGCGATCCGGAGGTGCCACCCGTCGCGGAGCTCGGTGC
CGCACCCGAGTCCGCCGCGGCGCTGTTCGGCCCCCGCCTCGCGACCGCGCAGCGGTACGCGGAAGTCCTCGGCACCGCGG
GTGTCGAGCGGGGCCTGCTCGGCCCGCGGGAAGTCGACCGCATCTGGGACCGTCACATCCTCAACAGCGCGGCGGTCGCC
GAACTCCTGGGCCGCGGTGATCGGATCATCGACATCGGCAGCGGGGCGGGGCTGCCCGGCATCCCGTTGGCCATCGCGCG
ACCCGATCTCGAGGTGGTATTGCTGGAGCCGCTCTTGCGGCGCAGCGAGTTTCTCACCGAGGTGGTGGACGAACTAGGGT
TAGCCGTCGAGGTGGTCCGCGGGCGCGCGGAAGAGCGGCCCGTGCGGGACCGGTTCGGGGAGAGGGACGCGGCGGTGTCG
CGAGCGGTTGCAGCGTTGGACAAGCTGACGAAGTGGAGTATGCCGTTGCTACGCCACGACGGCCGGATGCTCGCCATCAA
GGGGGAGCGGGCGGCGGAGGAAGTTGACCGATACCGGCGTGTGATGACAGCATCGGGCGCCGCTGATGTCAGGGTGGTGA
CATGTGGCGCGAACTATTTGCGTCCCCCCGCAACCGTAGTTTCAGCTCGACGCGCAAAGCCGCCGCACCCCAAGTCGGCA
CGGACCGGGAAGGCCGGAACCCGATGA

Upstream 100 bases:

>100_bases
GTGGTCGTCCTGCACGACTGACGGCCCGAAGTTACAGCGGTGTAGTTCGCTGCCGTGTGGCGGCCGTCCGAACGTTGAAG
GTGCACACGCCAACCAGGGG

Downstream 100 bases:

>100_bases
CTTCTTCAGGAGATTGGCCGGTGGCTTCTTCGGAGGCGCGGGAGGGCGCGGCGACGCCCGCGCCCGACGCACCGAGCGCG
ACGCACACCCCGGCGGCACC

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase; Glucose-inhibited division protein B

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFHVKHVGPVEPAAGDPEVPPVAELGAAPESAAALFGPRLATAQRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVA
ELLGRGDRIIDIGSGAGLPGIPLAIARPDLEVVLLEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS
RAVAALDKLTKWSMPLLRHDGRMLAIKGERAAEEVDRYRRVMTASGAADVRVVTCGANYLRPPATVVSARRAKPPHPKSA
RTGKAGTR

Sequences:

>Translated_248_residues
MFHVKHVGPVEPAAGDPEVPPVAELGAAPESAAALFGPRLATAQRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVA
ELLGRGDRIIDIGSGAGLPGIPLAIARPDLEVVLLEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS
RAVAALDKLTKWSMPLLRHDGRMLAIKGERAAEEVDRYRRVMTASGAADVRVVTCGANYLRPPATVVSARRAKPPHPKSA
RTGKAGTR
>Mature_248_residues
MFHVKHVGPVEPAAGDPEVPPVAELGAAPESAAALFGPRLATAQRYAEVLGTAGVERGLLGPREVDRIWDRHILNSAAVA
ELLGRGDRIIDIGSGAGLPGIPLAIARPDLEVVLLEPLLRRSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVS
RAVAALDKLTKWSMPLLRHDGRMLAIKGERAAEEVDRYRRVMTASGAADVRVVTCGANYLRPPATVVSARRAKPPHPKSA
RTGKAGTR

Specific function: Specifically methylates the N7 position of guanosine in position 518 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=151, Percent_Identity=39.0728476821192, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_MYCPA (Q9L7M3)

Other databases:

- EMBL:   AE016958
- EMBL:   AF222789
- RefSeq:   NP_963279.1
- ProteinModelPortal:   Q9L7M3
- SMR:   Q9L7M3
- EnsemblBacteria:   EBMYCT00000038960
- GeneID:   2720804
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP4345c
- NMPDR:   fig|262316.1.peg.4345
- GeneTree:   EBGT00050000016057
- HOGENOM:   HBG686577
- OMA:   VPRLWER
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 26593; Mature: 26593

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHVKHVGPVEPAAGDPEVPPVAELGAAPESAAALFGPRLATAQRYAEVLGTAGVERGLL
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPLAIARPDLEVVLLEPLLR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHH
RSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVSRAVAALDKLTKWSMPLLRHD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCC
GRMLAIKGERAAEEVDRYRRVMTASGAADVRVVTCGANYLRPPATVVSARRAKPPHPKSA
CCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCC
RTGKAGTR
CCCCCCCC
>Mature Secondary Structure
MFHVKHVGPVEPAAGDPEVPPVAELGAAPESAAALFGPRLATAQRYAEVLGTAGVERGLL
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GPREVDRIWDRHILNSAAVAELLGRGDRIIDIGSGAGLPGIPLAIARPDLEVVLLEPLLR
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHH
RSEFLTEVVDELGLAVEVVRGRAEERPVRDRFGERDAAVSRAVAALDKLTKWSMPLLRHD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCC
GRMLAIKGERAAEEVDRYRRVMTASGAADVRVVTCGANYLRPPATVVSARRAKPPHPKSA
CCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCC
RTGKAGTR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA