| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410433
Identifier: 41410433
GI number: 41410433
Start: 4812371
End: 4814773
Strand: Direct
Name: 41410433
Synonym: MAP4335
Alternate gene names: NA
Gene position: 4812371-4814773 (Clockwise)
Preceding gene: 41410432
Following gene: 41410434
Centisome position: 99.64
GC content: 73.7
Gene sequence:
>2403_bases GTGACGGCGCCGCGTTTGTGTTGGGCCGGCGGGTTGCGCATCGCCGCCGTGCTCGGCGTCCTGGCCGGGCTTGCGGTGCT CACCGGGCCGGTGACACCGCGCGCGGTCGCCGGCGAGCCGGGTGTGACGCCGTTCGTCCGGGTGCGCATCGACCAGGTCA CCCCCGACGTCGTCACCACCACCAGCCCGCCCGTCGTCACGGTCAGCGGCATGGTGACCAACATCGGCGACCGACCCGTC CGCGACGTCATGGTCCGCCTCGAGCACGCCGGCCCGGTCACCGCGTCGGCGGGTTTGCGCACCAGCCTGGACGGCGACAC CGACCAGTACCAGGCCGCCGCCGACTTTCTCACCGTCGCACCCGAACTGCAGCGCGGGCAGGAGGTCGGCTTCACCCTGT CGGCGCCGCTGCGCGCGCTGACCAAGCAGTCGCTGGGCGTCGAGAAGCCCGGCATCTATCCCGTCCTGGTCAACGTCAAC GGCACGCCCGACTACGGCGCGCCCGCGCGGCTGGACAACGCGCGCTTCCTGCTGCCCGTGGTGGGGGTGCCGCCGGACCG CGCCGACGACCTCGGCTCGGCCGTCGCACCCGACACCTCCAAACCGGTGGGGATCACCATGCTGTGGCCACTGGCCGACC GGCCCCGGCTGGCCCCCGGCGTGCCGGGCGGCACCATCCCCGTCCGCCTGGTCGACGACGACCTGGCCACCTCGCTGGCC AGCGGTGGCCGGCTCGACATCCTACTGGCCGCGGCCGAGGTCGCCACCAGCCACGACGTCGACCCCGACGGCGCCGTCGG CCGCGCGCTGTGCCTGGCGGTCGACCCGGATCTGCTGGTCACCGTCAACGCCATGACCGCGGGCTACGTCGTCTCCGACT CCCCCGACGGGCCGGCCCAACTGCCCGGCACCCCCACCCACCCGGGCACGGGGCAGGCCACCGCGACCGAATGGCTCAAC CGGCTGCGGGCACTGGCGCACCGCACCTGCGTGGCCCCGCTGCCCTACGCGCAGGCCGACCTCGATGCCCTGCAGCGCGT CAACGACCCGGGCCTCAGCAACACCGCCCTCACCAGCGTCAACAGCATCGTCGACAAGATCCTGGACGTCCCCTCCACCC GCGGCGCCACGCTGATGCCCGACGGGCGGCTGACCGGCCGGGCGGTCAAACTGCTCGGCGCCAACCAGACCACCGTCGCG GTCACCGCCGCCGACCTGTCGGCCGGCGACGCCCAGGGCTCCTCGGAGACCAGCGTCGACACCGCGCCGCGGCGGGTGTC CCCGCAGGTCGTGGCGGCGCCGTTCGACCCGGCCGTCGGGGCCGCGCTGGCCGGCGCCGGCGTCAACCCCGAAGTGCCGA CCTACCTCGACTCGTCGCTGACCGTTCGGCTGGCTCACGATTCGGTGACCGCCCGCCGCCAGGACGCGCTGGGCTCCATG TTCTGGCACGCGCTGCGCCACGACGACACCCCCCGCACCCAGCTCCTGGTCCCCCCGGCGACCTGGAATCTGCAGGCCGA CGATGCGCAGGTGATCTTGACCGCGCTGACCACCAGCATCCGCTCCGGTCTGGCGGTGCCTCGCCCGCTGCCGGCGGTGA TCGGCGAAGCCACCCAGGCCGCACAAACCGGCGCCCCACCGTCGGACCAGGTCAGCGCGGACGGCTCGGCCCGCGGGCAG TTCAACGACGACGTCACCGGCGCGATCACCGGTCAGGTCGGCCGGCTGTGGGGGCTGACGTCGGCGCTGATGACCGACGA CCGCACCGGGCTGACCGGCGTGCAGTACACCGCGCCGCTGCGCGAGGACATGCTGCGCGCGCTGAGCCAATCCGAACCGC CGGACAGCCGCAACGGGCTGGCCCAGCAGCGGCTGGCGGTGGTCGGCAAGACGATCAACGACCTGTTCGGCGCCGTGACG ATCGTCAACCCGGGTGGCTCCTACACCCTGGCCACCGAGCACAGTCCGCTGCCGCTGGCGCTGCACAACGGCCTGGCCGT GCCGATCCGGGTGCGGGTGCACGTGGACGCCCCGCCCGGCATGAACGTCACCGACGTCGGGGTGATCGAGCTGCCGCCGG GGTACCTGCCGCTGCGGATCCCGATCGAGGTGAACTTCACCCAGCGGGTCGCGGTCGACGTGACCTTGCGGACCGCCGAC GGGATGCGGCTGGGCGAACCGGTGCGGTTGTCGGTGCACTCCAACGCCTACGGCAAGGTGCTGTTCGCCATCACCCTGTC CGCCGCGGCGGTGCTGGTGCTGCTGGCGGGCCGGCGGCTGTGGCACCGCTTCCGCGGCCAGCCCGATCGCGCCGACCTGG ACCGCCCCGATCCCCCCGATGCCCGGCACGCCGACCCGCACGACCTCGCCGACCCGCGCGTCGAACAAGAGCACCGCGTA TGA
Upstream 100 bases:
>100_bases CGCGCCGCCGCCCGCAGACGCATTCCCGGACGCGGCATTCGGAGACGCGGCATTCGGACAAACCGGCCACCGGCCGGAAG AACGGCCACGGACCGGGGCC
Downstream 100 bases:
>100_bases ACCCCGCCTACCGGCAGGCCGCACCGCACCACCGCCGCCTGCCCGAGCCGCCGCGGCGTCCCCGCATGCCGGGCTCCCCG CCGACCGGGCCGCTGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Secreted Protein
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MTAPRLCWAGGLRIAAVLGVLAGLAVLTGPVTPRAVAGEPGVTPFVRVRIDQVTPDVVTTTSPPVVTVSGMVTNIGDRPV RDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLTVAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVN GTPDYGAPARLDNARFLLPVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLA SGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQLPGTPTHPGTGQATATEWLN RLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALTSVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVA VTAADLSAGDAQGSSETSVDTAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQDALGSM FWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVIGEATQAAQTGAPPSDQVSADGSARGQ FNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGVQYTAPLREDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVT IVNPGGSYTLATEHSPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDVTLRTAD GMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPDARHADPHDLADPRVEQEHRV
Sequences:
>Translated_800_residues MTAPRLCWAGGLRIAAVLGVLAGLAVLTGPVTPRAVAGEPGVTPFVRVRIDQVTPDVVTTTSPPVVTVSGMVTNIGDRPV RDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLTVAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVN GTPDYGAPARLDNARFLLPVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLA SGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQLPGTPTHPGTGQATATEWLN RLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALTSVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVA VTAADLSAGDAQGSSETSVDTAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQDALGSM FWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVIGEATQAAQTGAPPSDQVSADGSARGQ FNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGVQYTAPLREDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVT IVNPGGSYTLATEHSPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDVTLRTAD GMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPDARHADPHDLADPRVEQEHRV >Mature_799_residues TAPRLCWAGGLRIAAVLGVLAGLAVLTGPVTPRAVAGEPGVTPFVRVRIDQVTPDVVTTTSPPVVTVSGMVTNIGDRPVR DVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLTVAPELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNG TPDYGAPARLDNARFLLPVVGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLAS GGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQLPGTPTHPGTGQATATEWLNR LRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALTSVNSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAV TAADLSAGDAQGSSETSVDTAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQDALGSMF WHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVIGEATQAAQTGAPPSDQVSADGSARGQF NDDVTGAITGQVGRLWGLTSALMTDDRTGLTGVQYTAPLREDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVTI VNPGGSYTLATEHSPLPLALHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDVTLRTADG MRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPDARHADPHDLADPRVEQEHRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83563; Mature: 83432
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPRLCWAGGLRIAAVLGVLAGLAVLTGPVTPRAVAGEPGVTPFVRVRIDQVTPDVVTT CCCCCEEHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCCEEEC TSPPVVTVSGMVTNIGDRPVRDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLTVA CCCCEEEEECEEECCCCCCHHHHHHHHHCCCCEECCCCCEECCCCCCHHHHHHHHHHHCC PELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLLPV HHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE VGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLA ECCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHH SGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQ CCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECEEEECCCCCCCC LPGTPTHPGTGQATATEWLNRLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALTSV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH NSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAVTAADLSAGDAQGSSETSVD HHHHHHHHCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCC TAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQDALGSM CCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHH FWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVIGEATQA HHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHH AQTGAPPSDQVSADGSARGQFNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGVQYTAPL HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECHH REDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVTIVNPGGSYTLATEHSPLPLA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCEE LHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDVTLRTAD ECCCEEEEEEEEEEECCCCCCCEECEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECC GMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPD CCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ARHADPHDLADPRVEQEHRV CCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure TAPRLCWAGGLRIAAVLGVLAGLAVLTGPVTPRAVAGEPGVTPFVRVRIDQVTPDVVTT CCCCEEHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEECCCCCEEEC TSPPVVTVSGMVTNIGDRPVRDVMVRLEHAGPVTASAGLRTSLDGDTDQYQAAADFLTVA CCCCEEEEECEEECCCCCCHHHHHHHHHCCCCEECCCCCEECCCCCCHHHHHHHHHHHCC PELQRGQEVGFTLSAPLRALTKQSLGVEKPGIYPVLVNVNGTPDYGAPARLDNARFLLPV HHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE VGVPPDRADDLGSAVAPDTSKPVGITMLWPLADRPRLAPGVPGGTIPVRLVDDDLATSLA ECCCCCCCHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHH SGGRLDILLAAAEVATSHDVDPDGAVGRALCLAVDPDLLVTVNAMTAGYVVSDSPDGPAQ CCCCEEEEEEEHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECEEEECCCCCCCC LPGTPTHPGTGQATATEWLNRLRALAHRTCVAPLPYAQADLDALQRVNDPGLSNTALTSV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH NSIVDKILDVPSTRGATLMPDGRLTGRAVKLLGANQTTVAVTAADLSAGDAQGSSETSVD HHHHHHHHCCCCCCCCEECCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCC TAPRRVSPQVVAAPFDPAVGAALAGAGVNPEVPTYLDSSLTVRLAHDSVTARRQDALGSM CCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHH FWHALRHDDTPRTQLLVPPATWNLQADDAQVILTALTTSIRSGLAVPRPLPAVIGEATQA HHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHH AQTGAPPSDQVSADGSARGQFNDDVTGAITGQVGRLWGLTSALMTDDRTGLTGVQYTAPL HHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECHH REDMLRALSQSEPPDSRNGLAQQRLAVVGKTINDLFGAVTIVNPGGSYTLATEHSPLPLA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCCEE LHNGLAVPIRVRVHVDAPPGMNVTDVGVIELPPGYLPLRIPIEVNFTQRVAVDVTLRTAD ECCCEEEEEEEEEEECCCCCCCEECEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECC GMRLGEPVRLSVHSNAYGKVLFAITLSAAAVLVLLAGRRLWHRFRGQPDRADLDRPDPPD CCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ARHADPHDLADPRVEQEHRV CCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA