| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410411
Identifier: 41410411
GI number: 41410411
Start: 4782997
End: 4784121
Strand: Direct
Name: 41410411
Synonym: MAP4313
Alternate gene names: NA
Gene position: 4782997-4784121 (Clockwise)
Preceding gene: 41410410
Following gene: 41410412
Centisome position: 99.03
GC content: 73.24
Gene sequence:
>1125_bases GTGGGACACGCTTTCTCATTCCTGGGCCTGGCGGCTCACCTGGGTCGCGGCGCGGGCCGGGTGTCCGTCGACGCGGTGCT GGGCGGCCGGTTCGGCCTGCCGCGCACGGTCGACGAGATCGACCCGGCGGTGCTGTCCCGGGTGATGGGCACCACGGTGC GGACGGTGCGGGTGCTCAGCCGCGACGCCGGGACGTCCTCGCGGGCCCGGCTGGTGCTGACCGGCAAGGACGTCCCCGAC TCGGTGTTCGTCAAGGTCGCGGCCCAGACCGCCGCCACCCGCCTGATGGGTGAGCTCGGCCGGCTCGGCTGCACCGAGGT GCGGTTCTACCGCCAGCTGGCGCCGCAGGTGGTCGGCGTCCCCTACTGCTACGGCGCCGCGTTCGACGCCTGGACGGGCC GCTACCTGCTGGTGCTGGAGGATCTGCCGGCCGAGGCGTGCGAGTTCCCAGACACCTTGCACCCGCTGTCCGCCGACCAG GCCGGCCTCGTCGTCGAGCTGCTGGCCGACCTGCACGCCACCTTCTGGAACCGGTTGCCCCGCGACGGCCGCGGCCCGCT GGGCTGGCTCTACACGCCGTCCGGCGACGTCACCTCCCTTCTGACCGGGTCGCTGATGCACAGCTCGATCAAGCGGCTGG CCGAGCGCACCAGCATCCCGGTGCGCGACGGCGTCTTCATCGCCGACAACTACCGCGCCGTCGCCGCCCTCATCGACGCC GCCCCGCACACCGTGATGCACGGCGACGCCCATCCGGGCAACATGTACTTCCACGGCGGCAAGGCCGGGCTGCTGGACTG GCAGGCGGTGCGGCGCGGGCATCCGTCCCGGGAGCTGGCCTACACGCTGATCACCAGCCTGACGCCGGAGGATCGCCGGG CCACCCAGCGCGACCTGCTCGACGACTACCGCCGCGCGCTGGCCGCGGCCGGCGGCCCGCAGCTGGACCGCGACGAGCTG TGGCTGCGGTTTCGCCAGGCCGCGCTGTACGCCTACGCCGCCCCGCTGATCACCGCCGGCATGGGCGGCATGCAGGTCGA GGACATCGCCATGGAAGGGCTGCGGCGCGGCGTCGCCGCGCTCGAGGACCTGGAAACCGTCGCCGCCCTGAAGAGTTCGC TCTAG
Upstream 100 bases:
>100_bases ATGTCCAGACGTTCGAGTGGTTCTCCTCCCGGACGCCGGTGTTCAGCACGCAGCACCGCAACCGGTCGGCGAACCAGGAT GGTTGGACATGAAAAACCCT
Downstream 100 bases:
>100_bases CTCTGGCGGCCCCGCCCGGCGGCACCGAAATTCCGCCGAAGCTATTGCCTTCGCCGCGCCACGAGTTACGCTACCTACCG TAGCGAAATATGGCGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Conserved Domain Protein
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MGHAFSFLGLAAHLGRGAGRVSVDAVLGGRFGLPRTVDEIDPAVLSRVMGTTVRTVRVLSRDAGTSSRARLVLTGKDVPD SVFVKVAAQTAATRLMGELGRLGCTEVRFYRQLAPQVVGVPYCYGAAFDAWTGRYLLVLEDLPAEACEFPDTLHPLSADQ AGLVVELLADLHATFWNRLPRDGRGPLGWLYTPSGDVTSLLTGSLMHSSIKRLAERTSIPVRDGVFIADNYRAVAALIDA APHTVMHGDAHPGNMYFHGGKAGLLDWQAVRRGHPSRELAYTLITSLTPEDRRATQRDLLDDYRRALAAAGGPQLDRDEL WLRFRQAALYAYAAPLITAGMGGMQVEDIAMEGLRRGVAALEDLETVAALKSSL
Sequences:
>Translated_374_residues MGHAFSFLGLAAHLGRGAGRVSVDAVLGGRFGLPRTVDEIDPAVLSRVMGTTVRTVRVLSRDAGTSSRARLVLTGKDVPD SVFVKVAAQTAATRLMGELGRLGCTEVRFYRQLAPQVVGVPYCYGAAFDAWTGRYLLVLEDLPAEACEFPDTLHPLSADQ AGLVVELLADLHATFWNRLPRDGRGPLGWLYTPSGDVTSLLTGSLMHSSIKRLAERTSIPVRDGVFIADNYRAVAALIDA APHTVMHGDAHPGNMYFHGGKAGLLDWQAVRRGHPSRELAYTLITSLTPEDRRATQRDLLDDYRRALAAAGGPQLDRDEL WLRFRQAALYAYAAPLITAGMGGMQVEDIAMEGLRRGVAALEDLETVAALKSSL >Mature_373_residues GHAFSFLGLAAHLGRGAGRVSVDAVLGGRFGLPRTVDEIDPAVLSRVMGTTVRTVRVLSRDAGTSSRARLVLTGKDVPDS VFVKVAAQTAATRLMGELGRLGCTEVRFYRQLAPQVVGVPYCYGAAFDAWTGRYLLVLEDLPAEACEFPDTLHPLSADQA GLVVELLADLHATFWNRLPRDGRGPLGWLYTPSGDVTSLLTGSLMHSSIKRLAERTSIPVRDGVFIADNYRAVAALIDAA PHTVMHGDAHPGNMYFHGGKAGLLDWQAVRRGHPSRELAYTLITSLTPEDRRATQRDLLDDYRRALAAAGGPQLDRDELW LRFRQAALYAYAAPLITAGMGGMQVEDIAMEGLRRGVAALEDLETVAALKSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40416; Mature: 40285
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHAFSFLGLAAHLGRGAGRVSVDAVLGGRFGLPRTVDEIDPAVLSRVMGTTVRTVRVLS CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH RDAGTSSRARLVLTGKDVPDSVFVKVAAQTAATRLMGELGRLGCTEVRFYRQLAPQVVGV HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC PYCYGAAFDAWTGRYLLVLEDLPAEACEFPDTLHPLSADQAGLVVELLADLHATFWNRLP CHHHCCCHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RDGRGPLGWLYTPSGDVTSLLTGSLMHSSIKRLAERTSIPVRDGVFIADNYRAVAALIDA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHC APHTVMHGDAHPGNMYFHGGKAGLLDWQAVRRGHPSRELAYTLITSLTPEDRRATQRDLL CCCCEEECCCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH DDYRRALAAAGGPQLDRDELWLRFRQAALYAYAAPLITAGMGGMQVEDIAMEGLRRGVAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LEDLETVAALKSSL HHHHHHHHHHHHCC >Mature Secondary Structure GHAFSFLGLAAHLGRGAGRVSVDAVLGGRFGLPRTVDEIDPAVLSRVMGTTVRTVRVLS CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH RDAGTSSRARLVLTGKDVPDSVFVKVAAQTAATRLMGELGRLGCTEVRFYRQLAPQVVGV HCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC PYCYGAAFDAWTGRYLLVLEDLPAEACEFPDTLHPLSADQAGLVVELLADLHATFWNRLP CHHHCCCHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RDGRGPLGWLYTPSGDVTSLLTGSLMHSSIKRLAERTSIPVRDGVFIADNYRAVAALIDA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHC APHTVMHGDAHPGNMYFHGGKAGLLDWQAVRRGHPSRELAYTLITSLTPEDRRATQRDLL CCCCEEECCCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH DDYRRALAAAGGPQLDRDELWLRFRQAALYAYAAPLITAGMGGMQVEDIAMEGLRRGVAA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LEDLETVAALKSSL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA