Click here to switch to the map view.

The map label for this gene is 41410410

Identifier: 41410410

GI number: 41410410

Start: 4782262

End: 4782882

Strand: Direct

Name: 41410410

Synonym: MAP4312

Alternate gene names: NA

Gene position: 4782262-4782882 (Clockwise)

Preceding gene: 41410407

Following gene: 41410411

Centisome position: 99.02

GC content: 70.37

Gene sequence:

>621_bases
ATGGAACCGAGCCGGCGGTGGGGCGACGACCGCGCGATCCTCGACGACGAGGAGGCCCGCAGACGGATCCTGGAGGCCGC
CGGCCGCTGCATCGTGCGGCGGGGCAACACCCAGTTCCGGATGGGCGAGGTCGCCGACGAGGCGGGCGTGTCACGGTCGA
CGGTCTACCGCTACTTCCCCGGCCGCGACGACGTGCTGCTGGGCCTGATGCTGCGCCGAGTGGACCACGCCCTCGCGGAG
TCGGTGCGCTCGCTGCCCGCCCCCGAGGACCCCGTTCGCTCGGTGCCGCGGATGGTGCTGGCGCGGGTGGAATCGGTGGA
CGGCAACCCGCTGAACGAAGCGTTGTTCGCCGCCGAGAGCACGGCGATGGCCAGCGCGCTGCAGAAGGGCTCCGAACCAC
TGGTCGAGCTGCTGTTGCGGCATTACGGCCCGCTGCTGGAGCGCTGGAAGGCGGCGGGGCTGCTCTACCCGGACGTCGAT
TTCCGGTCCGTCGTGCAGTGGTTGCACACCGCGACGCTGTTCCTGCTGGCGCCCTCCTGGCGATATCGGCCGCACGCCGA
CAAGCGCCGGTTCGTCGAGCAGTTCGTGGTGCGGGCCTTGGTGCCACAGATCAGACAATAA

Upstream 100 bases:

>100_bases
TGGTTGCGCGGCAAGGTATTTCGTCAACAGGTCCGGCCCTGTCCGCGCTGCTGCGGATCCGATAGCCAAGCCGCACAACG
CATCCCGTAACATCGCCGCC

Downstream 100 bases:

>100_bases
TCGTATATTGTCTGATGTCCAGACGTTCGAGTGGTTCTCCTCCCGGACGCCGGTGTTCAGCACGCAGCACCGCAACCGGT
CGGCGAACCAGGATGGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein TetR

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEPSRRWGDDRAILDDEEARRRILEAAGRCIVRRGNTQFRMGEVADEAGVSRSTVYRYFPGRDDVLLGLMLRRVDHALAE
SVRSLPAPEDPVRSVPRMVLARVESVDGNPLNEALFAAESTAMASALQKGSEPLVELLLRHYGPLLERWKAAGLLYPDVD
FRSVVQWLHTATLFLLAPSWRYRPHADKRRFVEQFVVRALVPQIRQ

Sequences:

>Translated_206_residues
MEPSRRWGDDRAILDDEEARRRILEAAGRCIVRRGNTQFRMGEVADEAGVSRSTVYRYFPGRDDVLLGLMLRRVDHALAE
SVRSLPAPEDPVRSVPRMVLARVESVDGNPLNEALFAAESTAMASALQKGSEPLVELLLRHYGPLLERWKAAGLLYPDVD
FRSVVQWLHTATLFLLAPSWRYRPHADKRRFVEQFVVRALVPQIRQ
>Mature_206_residues
MEPSRRWGDDRAILDDEEARRRILEAAGRCIVRRGNTQFRMGEVADEAGVSRSTVYRYFPGRDDVLLGLMLRRVDHALAE
SVRSLPAPEDPVRSVPRMVLARVESVDGNPLNEALFAAESTAMASALQKGSEPLVELLLRHYGPLLERWKAAGLLYPDVD
FRSVVQWLHTATLFLLAPSWRYRPHADKRRFVEQFVVRALVPQIRQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23487; Mature: 23487

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSRRWGDDRAILDDEEARRRILEAAGRCIVRRGNTQFRMGEVADEAGVSRSTVYRYFP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHCCCHHHHEEECC
GRDDVLLGLMLRRVDHALAESVRSLPAPEDPVRSVPRMVLARVESVDGNPLNEALFAAES
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TAMASALQKGSEPLVELLLRHYGPLLERWKAAGLLYPDVDFRSVVQWLHTATLFLLAPSW
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RYRPHADKRRFVEQFVVRALVPQIRQ
CCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPSRRWGDDRAILDDEEARRRILEAAGRCIVRRGNTQFRMGEVADEAGVSRSTVYRYFP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEHHHHHHHHCCCHHHHEEECC
GRDDVLLGLMLRRVDHALAESVRSLPAPEDPVRSVPRMVLARVESVDGNPLNEALFAAES
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
TAMASALQKGSEPLVELLLRHYGPLLERWKAAGLLYPDVDFRSVVQWLHTATLFLLAPSW
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RYRPHADKRRFVEQFVVRALVPQIRQ
CCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA