| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410383
Identifier: 41410383
GI number: 41410383
Start: 4752470
End: 4753972
Strand: Direct
Name: 41410383
Synonym: MAP4285
Alternate gene names: NA
Gene position: 4752470-4753972 (Clockwise)
Preceding gene: 41410382
Following gene: 41410384
Centisome position: 98.4
GC content: 72.46
Gene sequence:
>1503_bases TTGGTCGGGCCGCCGCTTTCGGTCATCCCGGCCGACCGGTCGACCGCCACCTCCCCCTCGCGCAGCGCTCGATCTAGCAA AAGGTCACGACCGTTGGAGCAGTTCTTCGGACAACTGTCGCTGCTGCACGGCTGGCTGCCGCCGACCGTGCAGGGCCTGG CGCTGCTGATGCTGGTCGCCGCGATCCACTGGCGGGCCCGCGGCTGGCTCAAGCGGGTGCTGCCGGCGGCGCTGGTCGCC GCGGTCGCGGTGACCGTGCTGGCGCGCTGGTACATCACCTCGCTCGGGGTGGCCGGGGATCCGGCGCCGACGGCGCTGTG GTTCTGGATCGCGCTGAGCGGTCTGGCCGCGGCCGTGTTCCTGGTGGGCTGGCGGGGCGTGCGCTGGTGGCGACGCGGGC TGGCGGTGCTGTCGATACCGCTGTGCGTGCTGTGCGCGGGCCTGGCGCTGAACGGCTGGGTGGGCTACTTCCCCACCGTG CTCGCGGCGTGGAATCAGCTGACCCAGGCGCCGCTGCCCGACCAGATCGACCGGCTGCGGGTCACCGAGATGCAGATCGC CGGCACCAGGCCGAGCAAGGGCGTGGTGGTGCCGGTGGACATCGACGGCAACGGCCCGTCGGGCTCACACTTCGCGCACC GCCGCGAACTGGTCTATCTGCCCCCGGCGTGGTTCAACAGCAACCCCCCACCCCGATTGCCGGCGGTCATGATGATCAGC TCGGCCTTCAACACCCCGGCCGACTGGCTGGGCCCGGGCGGCGCCTTCACCGCCATCGACAACTTCGCCGCCGCCCACCA CGGGTTCGCCCCGGTGCTGGTGTTCGTCGATCCCACCGGCTCGTTCGACAACGACACCGAGTGCGTCAACGGCAGCCGCG GCAACGCCGCCGACCACCTGACCAAGGACATCCAGCCGTTCATGGTGTCGAACTTCGGCGTCAGCGCCGACCGGGCCAAC TGGGGCGTCGCCGGATGGTCGATGGGCGGCACCTGCGCCGTCGACCTGGCCGTCATGCACCCGGAGATGTTCCGCGCCTT CGTCGACATCGCGGGCGACCGCGGCCCCAACGTCGGCCCCAAGGACCAATCCGTGGCGCGGCTGTTCGGCGGCGATCAGG CCGCGTGGGCGGCCTTCGACCCGGTCACGGTGATGACCAGGCACGGTCGCTACGCCGACTTGTCCGGTTGGTTCGAGGTG CCCGGGGCCGACGTGGCGCGCACCGCGCAGCAGGGCAACGCCGATCCAGCACCCGCCCTGGTGGCGTCCAGCAGCGACCC GGCCGCCAACCCCGAGGGCCAGGATGCCGCCGCGCACTCGCTGTGCGCGGTCGGCGCCGCCAACGGCATCGCCTGCGCGG TGGTCACCCAGCCGGGCAAGCACGACTGGCCGTTCGCCGCCCAGGCGTTTGCCACCGCGCTGCCGTGGCTGGCCTGGACG ATCGGCACGCCCAACACCGAACCGGTGCAGCTGCCGCAGCGGGCCGCCGCGCCGCCGCGGTGA
Upstream 100 bases:
>100_bases CGTCGTCGGCAACAGCCTGCGGCTGCGCTCGTTCGCCAGCATCATCCCCGGCGCGTGAGCCGCGCAGCATCGGCCGGCCG GCGGCGCCGGTATGGGATAG
Downstream 100 bases:
>100_bases TTCCGGCAGCTGGGCTGTCTCGGGGCGACAGGCAACAAATTCCCCATAATTCACAGCTGACCCACCCGTAACGGAGCCGC CGGATCGGCGGCCCGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MVGPPLSVIPADRSTATSPSRSARSSKRSRPLEQFFGQLSLLHGWLPPTVQGLALLMLVAAIHWRARGWLKRVLPAALVA AVAVTVLARWYITSLGVAGDPAPTALWFWIALSGLAAAVFLVGWRGVRWWRRGLAVLSIPLCVLCAGLALNGWVGYFPTV LAAWNQLTQAPLPDQIDRLRVTEMQIAGTRPSKGVVVPVDIDGNGPSGSHFAHRRELVYLPPAWFNSNPPPRLPAVMMIS SAFNTPADWLGPGGAFTAIDNFAAAHHGFAPVLVFVDPTGSFDNDTECVNGSRGNAADHLTKDIQPFMVSNFGVSADRAN WGVAGWSMGGTCAVDLAVMHPEMFRAFVDIAGDRGPNVGPKDQSVARLFGGDQAAWAAFDPVTVMTRHGRYADLSGWFEV PGADVARTAQQGNADPAPALVASSSDPAANPEGQDAAAHSLCAVGAANGIACAVVTQPGKHDWPFAAQAFATALPWLAWT IGTPNTEPVQLPQRAAAPPR
Sequences:
>Translated_500_residues MVGPPLSVIPADRSTATSPSRSARSSKRSRPLEQFFGQLSLLHGWLPPTVQGLALLMLVAAIHWRARGWLKRVLPAALVA AVAVTVLARWYITSLGVAGDPAPTALWFWIALSGLAAAVFLVGWRGVRWWRRGLAVLSIPLCVLCAGLALNGWVGYFPTV LAAWNQLTQAPLPDQIDRLRVTEMQIAGTRPSKGVVVPVDIDGNGPSGSHFAHRRELVYLPPAWFNSNPPPRLPAVMMIS SAFNTPADWLGPGGAFTAIDNFAAAHHGFAPVLVFVDPTGSFDNDTECVNGSRGNAADHLTKDIQPFMVSNFGVSADRAN WGVAGWSMGGTCAVDLAVMHPEMFRAFVDIAGDRGPNVGPKDQSVARLFGGDQAAWAAFDPVTVMTRHGRYADLSGWFEV PGADVARTAQQGNADPAPALVASSSDPAANPEGQDAAAHSLCAVGAANGIACAVVTQPGKHDWPFAAQAFATALPWLAWT IGTPNTEPVQLPQRAAAPPR >Mature_500_residues MVGPPLSVIPADRSTATSPSRSARSSKRSRPLEQFFGQLSLLHGWLPPTVQGLALLMLVAAIHWRARGWLKRVLPAALVA AVAVTVLARWYITSLGVAGDPAPTALWFWIALSGLAAAVFLVGWRGVRWWRRGLAVLSIPLCVLCAGLALNGWVGYFPTV LAAWNQLTQAPLPDQIDRLRVTEMQIAGTRPSKGVVVPVDIDGNGPSGSHFAHRRELVYLPPAWFNSNPPPRLPAVMMIS SAFNTPADWLGPGGAFTAIDNFAAAHHGFAPVLVFVDPTGSFDNDTECVNGSRGNAADHLTKDIQPFMVSNFGVSADRAN WGVAGWSMGGTCAVDLAVMHPEMFRAFVDIAGDRGPNVGPKDQSVARLFGGDQAAWAAFDPVTVMTRHGRYADLSGWFEV PGADVARTAQQGNADPAPALVASSSDPAANPEGQDAAAHSLCAVGAANGIACAVVTQPGKHDWPFAAQAFATALPWLAWT IGTPNTEPVQLPQRAAAPPR
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: NA
Molecular weight: Translated: 52930; Mature: 52930
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGPPLSVIPADRSTATSPSRSARSSKRSRPLEQFFGQLSLLHGWLPPTVQGLALLMLVA CCCCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AIHWRARGWLKRVLPAALVAAVAVTVLARWYITSLGVAGDPAPTALWFWIALSGLAAAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVGWRGVRWWRRGLAVLSIPLCVLCAGLALNGWVGYFPTVLAAWNQLTQAPLPDQIDRLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHE VTEMQIAGTRPSKGVVVPVDIDGNGPSGSHFAHRRELVYLPPAWFNSNPPPRLPAVMMIS EEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEECCHHCCCCCCCCCCHHHHHH SAFNTPADWLGPGGAFTAIDNFAAAHHGFAPVLVFVDPTGSFDNDTECVNGSRGNAADHL HHCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHH TKDIQPFMVSNFGVSADRANWGVAGWSMGGTCAVDLAVMHPEMFRAFVDIAGDRGPNVGP HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHHHHHHHHHHCCCCCCCCC KDQSVARLFGGDQAAWAAFDPVTVMTRHGRYADLSGWFEVPGADVARTAQQGNADPAPAL CCHHHHHHHCCCCCCEEECCCHHEEECCCCEECCCCCEECCCHHHHHHHHCCCCCCCCEE VASSSDPAANPEGQDAAAHSLCAVGAANGIACAVVTQPGKHDWPFAAQAFATALPWLAWT EECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEE IGTPNTEPVQLPQRAAAPPR CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVGPPLSVIPADRSTATSPSRSARSSKRSRPLEQFFGQLSLLHGWLPPTVQGLALLMLVA CCCCCCEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AIHWRARGWLKRVLPAALVAAVAVTVLARWYITSLGVAGDPAPTALWFWIALSGLAAAVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH LVGWRGVRWWRRGLAVLSIPLCVLCAGLALNGWVGYFPTVLAAWNQLTQAPLPDQIDRLR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHE VTEMQIAGTRPSKGVVVPVDIDGNGPSGSHFAHRRELVYLPPAWFNSNPPPRLPAVMMIS EEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCEEEECCHHCCCCCCCCCCHHHHHH SAFNTPADWLGPGGAFTAIDNFAAAHHGFAPVLVFVDPTGSFDNDTECVNGSRGNAADHL HHCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHH TKDIQPFMVSNFGVSADRANWGVAGWSMGGTCAVDLAVMHPEMFRAFVDIAGDRGPNVGP HHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCHHHHHHHHHHHCCCCCCCCC KDQSVARLFGGDQAAWAAFDPVTVMTRHGRYADLSGWFEVPGADVARTAQQGNADPAPAL CCHHHHHHHCCCCCCEEECCCHHEEECCCCEECCCCCEECCCHHHHHHHHCCCCCCCCEE VASSSDPAANPEGQDAAAHSLCAVGAANGIACAVVTQPGKHDWPFAAQAFATALPWLAWT EECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHEEE IGTPNTEPVQLPQRAAAPPR CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1667221; 12948626 [H]