Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410337

Identifier: 41410337

GI number: 41410337

Start: 4705843

End: 4707141

Strand: Reverse

Name: 41410337

Synonym: MAP4239c

Alternate gene names: NA

Gene position: 4707141-4705843 (Counterclockwise)

Preceding gene: 41410338

Following gene: 41410335

Centisome position: 97.46

GC content: 76.67

Gene sequence:

>1299_bases
GTGAGGGTCGTGCGGCTGCTGGCGGTTTCGGCGCTGACGATGCTTCCGGTGTTCGAAACCCCTCCGGCGCACGCGGTTTC
GCCGCCGGCCGTCGAGGACAAGTGGTTGCCGAAGCCGGCGCGGCCGGCGCCGCCGTGGCCGACCGCGCAGCGCGAGGTGT
GCGCGACGCTGACGGCCGACTCGGGCCCGGGCCCGCGCGGCCCGGCGGGCGGGTCGGACCTGTCGGCGGTGTGGCAGCTC
AGCCGCGGCGCCGGCCAGCGCATCGCGGTCATCGACACCGGGGTCGCACGGCACCGCCGGCTGCCCGGGGTGGTGCCCGG
CGGCGACTACGTGTCCACCGGCGACGGCATCCAGGACTGCGACGCGCACGGCACGCTGGTCGCCGGAATCATCGCCGCCG
CAGCCGATCCCAAGTCCGACGAATTCAGCGGCATCGCACCGGAGGCCACGCTGATCAGCATCCGCCAGTCCAGCGCGAAG
TTCGGGCCCGCCGGCAACCGGTCGGGCGGCGGGGTCGGCGACGTCGACACCCTGGCCCAAGCCGTTCGCACCGCGGCCGA
TCTAGGCGCGTCGGTGATCAACATCTCCTCGGTGGCCTGCGCGCCGGTGGCCTCGGCGCCCGACGACCGGGCGCTGGGCG
CCGCGCTGGCCTACGCCGTCGACGTCAAGAACGCGGTCGTGGTGGCTGCCGCCGGCAACACCGGCGGGGCGGGGCAGTGC
CCGCCGCAGCAGCCGGATGCCACCTGGCAGACGATCACCGTCGCCGTCAGCCCCGCCTGGTACGACGACTACGTGCTGAC
CGTCGGTTCGGTGAACGCCGACGGAGCCCCGTCGGCGTTCAGCCTGGCCGGCCCGTGGGTGGACGTCGCGGCGCCCGGCG
AAGCGGTGACGTCGCTGGCGCCCGAACCGGTGTCCGGCACCAGCTATGCCGCCCCGGTGGTGAGCGGGCTGGCCGCGCTG
ATCCGGGCCCGCTTCCCCGCGCTGACCGCGCGCCAGGTGATGCAGCGCATCGAGGCGACGGCGCATCATCCGCCCGCCGG
GTGGGATCCCCTGGTCGGGCACGGCACCGTCGACCCGCTCGCCGCGGTCAGCGCGGAGACGGGCGCGCCGCCGCCCGCCC
CCAGAGCCGCGCCGGTGCCGATCGCGGCCCCGCCGCCGGCGCCCGCCCGTGATTCGCGCGCCCGGGACGTCGCGGTGCGC
GGAGCCGCGTTCTGCCTTGTCGCGCTGACGCTCGCCGCGGCCGCCGGGGCGGTCCGGGCCCGGCTACGGCGCACCCACGA
CGGTGTCGCGGGCGACTGA

Upstream 100 bases:

>100_bases
GGGCGGCCGACCTGCTGGAGTGGCTGGCGCTGGCCGCCCTGGTGCCGCTCACCTGCTGGATCGCCGGGCTGTACGGCACG
GTTCGGGGATTGACGCTCGG

Downstream 100 bases:

>100_bases
GGCGTTCGGTCTGCTCAACTCCGGCCCGGCCGGCAGCAGGGTGAGCAGCGGCCACGGCGCCGGGCTCGGCTGCCCCAGAC
CCAGGTCGGCCGCGGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Ak.1 protease [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL
SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK
FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC
PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL
IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR
GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD

Sequences:

>Translated_432_residues
MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL
SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK
FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC
PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL
IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR
GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD
>Mature_432_residues
MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL
SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK
FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC
PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL
IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR
GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500
- InterPro:   IPR009020 [H]

Pfam domain/function: PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 43221; Mature: 43221

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTAD
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECC
SGPGPRGPAGGSDLSAVWQLSRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDC
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCCEECCCCCCCCC
DAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAKFGPAGNRSGGGVGDVDTLAQ
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC
HHHHHHHHCHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCCCC
PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLA
CCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCEEECCCCHHHHHCC
PEPVSGTSYAAPVVSGLAALIRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPL
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
AAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVRGAAFCLVALTLAAAAGAVRA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRRTHDGVAGD
HHHHHCCCCCCC
>Mature Secondary Structure
MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTAD
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECC
SGPGPRGPAGGSDLSAVWQLSRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDC
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCCEECCCCCCCCC
DAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAKFGPAGNRSGGGVGDVDTLAQ
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
AVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC
HHHHHHHHCHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCCCC
PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLA
CCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCEEECCCCHHHHHCC
PEPVSGTSYAAPVVSGLAALIRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPL
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
AAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVRGAAFCLVALTLAAAAGAVRA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLRRTHDGVAGD
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7993087; 10588904 [H]