| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410337
Identifier: 41410337
GI number: 41410337
Start: 4705843
End: 4707141
Strand: Reverse
Name: 41410337
Synonym: MAP4239c
Alternate gene names: NA
Gene position: 4707141-4705843 (Counterclockwise)
Preceding gene: 41410338
Following gene: 41410335
Centisome position: 97.46
GC content: 76.67
Gene sequence:
>1299_bases GTGAGGGTCGTGCGGCTGCTGGCGGTTTCGGCGCTGACGATGCTTCCGGTGTTCGAAACCCCTCCGGCGCACGCGGTTTC GCCGCCGGCCGTCGAGGACAAGTGGTTGCCGAAGCCGGCGCGGCCGGCGCCGCCGTGGCCGACCGCGCAGCGCGAGGTGT GCGCGACGCTGACGGCCGACTCGGGCCCGGGCCCGCGCGGCCCGGCGGGCGGGTCGGACCTGTCGGCGGTGTGGCAGCTC AGCCGCGGCGCCGGCCAGCGCATCGCGGTCATCGACACCGGGGTCGCACGGCACCGCCGGCTGCCCGGGGTGGTGCCCGG CGGCGACTACGTGTCCACCGGCGACGGCATCCAGGACTGCGACGCGCACGGCACGCTGGTCGCCGGAATCATCGCCGCCG CAGCCGATCCCAAGTCCGACGAATTCAGCGGCATCGCACCGGAGGCCACGCTGATCAGCATCCGCCAGTCCAGCGCGAAG TTCGGGCCCGCCGGCAACCGGTCGGGCGGCGGGGTCGGCGACGTCGACACCCTGGCCCAAGCCGTTCGCACCGCGGCCGA TCTAGGCGCGTCGGTGATCAACATCTCCTCGGTGGCCTGCGCGCCGGTGGCCTCGGCGCCCGACGACCGGGCGCTGGGCG CCGCGCTGGCCTACGCCGTCGACGTCAAGAACGCGGTCGTGGTGGCTGCCGCCGGCAACACCGGCGGGGCGGGGCAGTGC CCGCCGCAGCAGCCGGATGCCACCTGGCAGACGATCACCGTCGCCGTCAGCCCCGCCTGGTACGACGACTACGTGCTGAC CGTCGGTTCGGTGAACGCCGACGGAGCCCCGTCGGCGTTCAGCCTGGCCGGCCCGTGGGTGGACGTCGCGGCGCCCGGCG AAGCGGTGACGTCGCTGGCGCCCGAACCGGTGTCCGGCACCAGCTATGCCGCCCCGGTGGTGAGCGGGCTGGCCGCGCTG ATCCGGGCCCGCTTCCCCGCGCTGACCGCGCGCCAGGTGATGCAGCGCATCGAGGCGACGGCGCATCATCCGCCCGCCGG GTGGGATCCCCTGGTCGGGCACGGCACCGTCGACCCGCTCGCCGCGGTCAGCGCGGAGACGGGCGCGCCGCCGCCCGCCC CCAGAGCCGCGCCGGTGCCGATCGCGGCCCCGCCGCCGGCGCCCGCCCGTGATTCGCGCGCCCGGGACGTCGCGGTGCGC GGAGCCGCGTTCTGCCTTGTCGCGCTGACGCTCGCCGCGGCCGCCGGGGCGGTCCGGGCCCGGCTACGGCGCACCCACGA CGGTGTCGCGGGCGACTGA
Upstream 100 bases:
>100_bases GGGCGGCCGACCTGCTGGAGTGGCTGGCGCTGGCCGCCCTGGTGCCGCTCACCTGCTGGATCGCCGGGCTGTACGGCACG GTTCGGGGATTGACGCTCGG
Downstream 100 bases:
>100_bases GGCGTTCGGTCTGCTCAACTCCGGCCCGGCCGGCAGCAGGGTGAGCAGCGGCCACGGCGCCGGGCTCGGCTGCCCCAGAC CCAGGTCGGCCGCGGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD
Sequences:
>Translated_432_residues MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD >Mature_432_residues MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTADSGPGPRGPAGGSDLSAVWQL SRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDCDAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAK FGPAGNRSGGGVGDVDTLAQAVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLAPEPVSGTSYAAPVVSGLAAL IRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPLAAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVR GAAFCLVALTLAAAAGAVRARLRRTHDGVAGD
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 43221; Mature: 43221
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTAD CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECC SGPGPRGPAGGSDLSAVWQLSRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDC CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCCEECCCCCCCCC DAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAKFGPAGNRSGGGVGDVDTLAQ CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH AVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC HHHHHHHHCHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCCCC PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLA CCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCEEECCCCHHHHHCC PEPVSGTSYAAPVVSGLAALIRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPL CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH AAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVRGAAFCLVALTLAAAAGAVRA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRRTHDGVAGD HHHHHCCCCCCC >Mature Secondary Structure MRVVRLLAVSALTMLPVFETPPAHAVSPPAVEDKWLPKPARPAPPWPTAQREVCATLTAD CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEECC SGPGPRGPAGGSDLSAVWQLSRGAGQRIAVIDTGVARHRRLPGVVPGGDYVSTGDGIQDC CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCCEECCCCCCCCC DAHGTLVAGIIAAAADPKSDEFSGIAPEATLISIRQSSAKFGPAGNRSGGGVGDVDTLAQ CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH AVRTAADLGASVINISSVACAPVASAPDDRALGAALAYAVDVKNAVVVAAAGNTGGAGQC HHHHHHHHCHHHEEHHHHHCCCCCCCCCCHHHHHHHHHHEECCCEEEEEECCCCCCCCCC PPQQPDATWQTITVAVSPAWYDDYVLTVGSVNADGAPSAFSLAGPWVDVAAPGEAVTSLA CCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCCCEEECCCCHHHHHCC PEPVSGTSYAAPVVSGLAALIRARFPALTARQVMQRIEATAHHPPAGWDPLVGHGTVDPL CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH AAVSAETGAPPPAPRAAPVPIAAPPPAPARDSRARDVAVRGAAFCLVALTLAAAAGAVRA HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLRRTHDGVAGD HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]