Click here to switch to the map view.

The map label for this gene is eccB4 [H]

Identifier: 41410336

GI number: 41410336

Start: 4704445

End: 4705878

Strand: Direct

Name: eccB4 [H]

Synonym: MAP4238

Alternate gene names: 41410336

Gene position: 4704445-4705878 (Clockwise)

Preceding gene: 41410333

Following gene: 41410339

Centisome position: 97.4

GC content: 76.71

Gene sequence:

>1434_bases
GTGGATAACCGCTTCGGCGGCGCCGCCCGGCGGCCTAGCGTGTGCGCAACGGATTCGCGGGGAAGGGGAGCAGTGCCGCG
TCGGCCCACCACGTGGCTGCAGGTCAGCGCGTACCGGTACCTGTCGCGCCGGCTGGAATGCGCGTTGCTGGGCCAGGACC
CGGCCGCGGCCGGCATGCGTGCCCGCGGCCAGCCCGCGGCGCTGTTGGCGGGGGCGGTGCTGACGGCGGCCGCGCTGGCC
GCAGCGACGTTGCTGGGTTTGCTGCGCCCGCACGTCGCGCTGGACGGGGCGCGGGTCGTGCTGGCCCGGGATTCCGGTGC
CCTGTTCGTCCGGGTCGGCGACACCTGGCATCCGGTGCTCAACCTGGCCTCGGCGCGGCTCATCGCCGCGTCGGCCGTCG
ATCCGCTCACCATCCGCCAGGCCGACCTGGACGGCAGCAAACGCGGTCCGCTGCTGGGCATTCCGGGCGCGCCCGCGTTC
CTCGGCCGGCCGCTGGCAGCGGCGGAGTCGTTGTGCGACAGCGACGGCGCCGGCGCAACCACGATCCTGCTCGGCCGCAC
GGACGCCGCCTCGATGCGCGTGCTGGGCGGCGGGCAGGCCATGCTGGTCGCGGCTGCCGCGGGTTCGCCGGCCTACCTGC
TGCACGACGGGCACCGGGCCCGGGTGGACCTGGCCGACGCCGCGGTGGTGCGGACGCTGCGGCTTGAGGGCCGGGCGCCG
CGGCTCGTCTCGCAGTCGTTGCTGGACGCCGTGCCGGAGGCGGCGCCGATCGCGGTTCCGCGGATACCCGGCCTGGGCGG
CGCGGCGCCGGGGCTGCCGGGATTCGCGATCGGCACTGTGCTTCGCATCATCCGCGCCGACGGTGACGAGTATTACGCGG
TGCTGGCCGGCGGCGTGCAGCGCATCGGCCGGGTGGCCGCCGACCTGCTGCGGCTAAGCAACCCGCAGGGCAGCGCCGAC
GCCGTTACCGTCGCACCCGACGCACTGCGCACCGCCCCGGTGGTCGCGGCGCTGCCGGTGGCCGGCTTCCCCGACCGGGC
GCCGACCGTGTCGGAGCCGGCCGCCACGATCTGCGCCGGCTGGGGAGACGCCCGATCCGTCGCGTTCCTGACCGGGGCGG
CGGTTCCGGTGCCGCCCGGTCGGGCGCCGGTGACCCTGGCGCAGGCCGACGGCCGCGGACCCGCGCTGGACGCGGTGTAC
CTGCCGCCCGGCCGCAGCGCCTACGTACGGGCCGGTGCGAACGCCGGCACCCGCTACCTGATCACCGACACCGGGGTCCG
GTTCGCCGTGCCCGACGACGACGCCGCGGCCGACCTGGGTCTGGGGCAGCCGAGCCCGGCGCCGTGGCCGCTGCTCACCC
TGCTGCCGGCCGGGCCGGAGTTGAGCAGACCGAACGCCTCAGTCGCCCGCGACACCGTCGTGGGTGCGCCGTAG

Upstream 100 bases:

>100_bases
GATCAGCGCCGATGAGCCCAGACCGAGGAGTCGGCCGATCCGGTGAGTTTTCACCGGGCAATTTTACCCAAATCGCGGCC
CGGCGAAACTCCCGCGACCT

Downstream 100 bases:

>100_bases
CCGGGCCCGGACCGCCCCGGCGGCCGCGGCGAGCGTCAGCGCGACAAGGCAGAACGCGGCTCCGCGCACCGCGACGTCCC
GGGCGCGCGAATCACGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component B4; Type VII secretion system protein eccB4; T7SS protein eccB4 [H]

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MDNRFGGAARRPSVCATDSRGRGAVPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRARGQPAALLAGAVLTAAALA
AATLLGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAF
LGRPLAAAESLCDSDGAGATTILLGRTDAASMRVLGGGQAMLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP
RLVSQSLLDAVPEAAPIAVPRIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGSAD
AVTVAPDALRTAPVVAALPVAGFPDRAPTVSEPAATICAGWGDARSVAFLTGAAVPVPPGRAPVTLAQADGRGPALDAVY
LPPGRSAYVRAGANAGTRYLITDTGVRFAVPDDDAAADLGLGQPSPAPWPLLTLLPAGPELSRPNASVARDTVVGAP

Sequences:

>Translated_477_residues
MDNRFGGAARRPSVCATDSRGRGAVPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRARGQPAALLAGAVLTAAALA
AATLLGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAF
LGRPLAAAESLCDSDGAGATTILLGRTDAASMRVLGGGQAMLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP
RLVSQSLLDAVPEAAPIAVPRIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGSAD
AVTVAPDALRTAPVVAALPVAGFPDRAPTVSEPAATICAGWGDARSVAFLTGAAVPVPPGRAPVTLAQADGRGPALDAVY
LPPGRSAYVRAGANAGTRYLITDTGVRFAVPDDDAAADLGLGQPSPAPWPLLTLLPAGPELSRPNASVARDTVVGAP
>Mature_477_residues
MDNRFGGAARRPSVCATDSRGRGAVPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRARGQPAALLAGAVLTAAALA
AATLLGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVLNLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAF
LGRPLAAAESLCDSDGAGATTILLGRTDAASMRVLGGGQAMLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP
RLVSQSLLDAVPEAAPIAVPRIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQRIGRVAADLLRLSNPQGSAD
AVTVAPDALRTAPVVAALPVAGFPDRAPTVSEPAATICAGWGDARSVAFLTGAAVPVPPGRAPVTLAQADGRGPALDAVY
LPPGRSAYVRAGANAGTRYLITDTGVRFAVPDDDAAADLGLGQPSPAPWPLLTLLPAGPELSRPNASVARDTVVGAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007795 [H]

Pfam domain/function: PF05108 DUF690 [H]

EC number: NA

Molecular weight: Translated: 48272; Mature: 48272

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRFGGAARRPSVCATDSRGRGAVPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMR
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEECCCCHHCCCC
ARGQPAALLAGAVLTAAALAAATLLGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCEEEEEECCCHHHHH
NLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAFLGRPLAAAESLCDSDGAGAT
HHHHHHEEECCCCCCEEEEECCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHCCCCCCCE
TILLGRTDAASMRVLGGGQAMLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP
EEEEECCCCCCEEEECCCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCC
RLVSQSLLDAVPEAAPIAVPRIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQ
HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH
RIGRVAADLLRLSNPQGSADAVTVAPDALRTAPVVAALPVAGFPDRAPTVSEPAATICAG
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCHHEECCCCCCCCCCCCCCCCCHHEEEC
WGDARSVAFLTGAAVPVPPGRAPVTLAQADGRGPALDAVYLPPGRSAYVRAGANAGTRYL
CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEE
ITDTGVRFAVPDDDAAADLGLGQPSPAPWPLLTLLPAGPELSRPNASVARDTVVGAP
EEECCEEEECCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MDNRFGGAARRPSVCATDSRGRGAVPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMR
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHHHCCEEEEECCCCHHCCCC
ARGQPAALLAGAVLTAAALAAATLLGLLRPHVALDGARVVLARDSGALFVRVGDTWHPVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEEEEEECCCEEEEEECCCHHHHH
NLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAFLGRPLAAAESLCDSDGAGAT
HHHHHHEEECCCCCCEEEEECCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHCCCCCCCE
TILLGRTDAASMRVLGGGQAMLVAAAAGSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP
EEEEECCCCCCEEEECCCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHCCCCCC
RLVSQSLLDAVPEAAPIAVPRIPGLGGAAPGLPGFAIGTVLRIIRADGDEYYAVLAGGVQ
HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHH
RIGRVAADLLRLSNPQGSADAVTVAPDALRTAPVVAALPVAGFPDRAPTVSEPAATICAG
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHCCHHEECCCCCCCCCCCCCCCCCHHEEEC
WGDARSVAFLTGAAVPVPPGRAPVTLAQADGRGPALDAVYLPPGRSAYVRAGANAGTRYL
CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCEEE
ITDTGVRFAVPDDDAAADLGLGQPSPAPWPLLTLLPAGPELSRPNASVARDTVVGAP
EEECCEEEECCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]